Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq266 289 5e-73 seq788 248 2e-60 >seq266 Length=19737 Score = 289 bits (320), Expect = 5e-73 Identities = 955/1466 (65%), Gaps = 53/1466 (4%) Strand=Plus/Plus Query 212684 GCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCAT 212743 || ||| || | ||| || ||| |||||| | || | | | | ||| |||||||| Sbjct 12413 GCTCAGGTGGATGTTGAGACTCTGGCTCTGGCACACAAAGGCGCCACGGTCTGCGGCCAT 12472 Query 212744 GTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTC 212803 || | || | ||||| || ||||||||| |||||| ||| | |||| || || Sbjct 12473 ATCGAGAATCACCTTCTGGCTGATCTCCCACACAGTCTTGTAGAGGGCCTTGATGTGGTC 12532 Query 212804 TGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTC 212863 |||| ||| | ||||||||| | || || | || | | || | | ||| Sbjct 12533 AGGGATGCCAGCGATGTTCTGGATTGAGCCGCCATGCGCAATAATCTTCTGCTTCATCGA 12592 Query 212864 CTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGAGGGTTGACTATCTGGA 212922 || |||||||||||| | || || || | | | ||| |||||||| | ||||| Sbjct 12593 GTCATTCCAGAGGCCCA-GCTCGACAAGCTCGCGCAGCAGCCACGGGTTGACCACCTGGA 12651 Query 212923 AGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGT 212982 | ||||| | ||||| | | | ||||| ||| ||||| ||||| | || ||||| Sbjct 12652 ACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCGT 12711 Query 212983 TGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCC 213042 || || || ||||| ||| ||| || |||||||| |||| ||| || ||| | Sbjct 12712 TGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATCAGCAGCGAGTTGC 12771 Query 213043 TCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGT 213102 || ||||||| | | || | ||| ||||||||||| ||||| Sbjct 12772 GCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCA---------CAGGT 12822 Query 213103 CCT-CGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCC 213161 || || | | | |||||||||||| |||||| || ||| | | ||||||||| Sbjct 12823 CCGACGGCGTGCG-GTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAGGGCTGCCC 12881 Query 213162 TGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCG 213221 | ||| | ||| | ||||| || |||||||||||| || || ||| || Sbjct 12882 TCGTACGTCTCGTATGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCTCCAAGGCCGCA 12941 Query 213222 TAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC-TGG-----GGACGTG 213275 | ||| ||||| ||||| |||| | || ||| ||||| ||| | ||| Sbjct 12942 TGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCTGTCGAACGGA 13001 Query 213276 AAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGT 213335 || ||| |||||| ||| |||| || || |||||||| ||||| |||||||| Sbjct 13002 TAGCCCATGATCATG------AACGCATCGGCAAGGCCCTGGACACCGATACCGATGGGG 13055 Query 213336 CTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGAT 213394 | ||| | || ||| || | | |||||| |||| ||||| ||||| |||||||| Sbjct 13056 CGGTGCCGCATGTTCGAGCGACGTGCACTC-TCCACAGGGTAGTAGTTGATATCGATGAT 13114 Query 213395 CTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACA- 213453 ||| ||||| | ||||||| | || | | |||| | | ||| | Sbjct 13115 GCGGTTCAGGTTCTTGCACACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTATGT 13174 Query 213454 ---CGTAGCCCCCGT--CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAAC 213508 || || || || ||| | |||| ||||| || || ||||||||||| || Sbjct 13175 CTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGTTGCACAC 13234 Query 213509 GGC---CACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCG 213565 || | | ||| | ||| ||||||| || ||||| ||||| ||||| || Sbjct 13235 AGCTGTCTCGTCCGGCGAGC---TGTACTCGATAATCTCCGTGCAGAGGTTCGAGCTCTT 13291 Query 213566 GATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCG-TTGGCAGAATCCTTGTAGAGCATG 213623 ||| ||||||||||||| ||||| ||| ||||| || || || |||||||| || | Sbjct 13292 GATCGTGCCCAGGTTCTTCTGGTT--ACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACA 13349 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTG 213683 | || || ||||| | || | | | || || | ||| || | | |||||| Sbjct 13350 AAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTG 13409 Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTC 213742 || ||| || | ||| | | || |||||||| ||||| || | | || || Sbjct 13410 ACAGAGCGCTTGGCG----CGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTC 13465 Query 213743 GTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCC 213801 | ||| || | | | |||| || || || ||||| ||||| || |||||| | Sbjct 13466 CTCGCCATAGCAGTCAG-CCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGC 13524 Query 213802 CGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCC 213861 ||| | | ||| | |||||||||| || || | ||||||||| ||||||||| | Sbjct 13525 CGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGC 13584 Query 213862 TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCG 213921 | | | || ||| ||| ||| ||||||||||| | ||| ||||| | ||||| Sbjct 13585 GCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCG 13644 Query 213922 CGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCA 213978 |||||||||||||| |||||| ||||||||||||| || | |||||||||||||||| Sbjct 13645 AGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCA 13704 Query 213979 CCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGT 214038 | | ||| ||||| | | ||| || | ||| || | |||||| | |||| Sbjct 13705 CGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGT 13764 Query 214039 TGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCAC 214098 | || || || || |||||||| | || | | |||| ||| || || || || | Sbjct 13765 TCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGC 13824 Query 214099 CGGCGTACTTGGAGATCATGGCGCAG 214124 |||| |||| |||||| || ||| Sbjct 13825 CGGCCGTCTTGCTGATCATCGCACAG 13850 >seq788 Length=40807 Score = 248 bits (274), Expect = 2e-60 Identities = 559/829 (67%), Gaps = 26/829 (3%) Strand=Plus/Minus Query 47860 CTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGG 47919 ||| || ||||| | ||| |||| | ||||||||||||||| ||| ||||||||| | Sbjct 2836 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGT 2777 Query 47920 TGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCG 47977 | ||| || | || || ||| | | | |||||| | ||||| || |||| Sbjct 2776 CGAGTTGTAGTGCTTCGGGTT--GCCGAGGTTGACGAGCAGGCGGTCCGCCACAAACTCA 2719 Query 47978 ATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTG 48037 ||||| | |||||||| ||||||||| || || || || ||||| || | || Sbjct 2718 ATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCAGCGAAACAGGCAAGGCGTCAGTC 2659 Query 48038 AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAAC-GCGGGACTCTGA 48096 | ||| |||| ||| || ||| || || | || | || || | | | || Sbjct 2658 AAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCACTGTGTCAGGGTGC 2599 Query 48097 GG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCT 48154 | | || || |||||| || | || | ||||||||||| |||||| ||| Sbjct 2598 GCACGCTTCTT---CAGGTGGCTGA---ACAGGAGACAGGCAAAGTCGGTGTGCAGGCCC 2545 Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || || ||||||| |||| ||||| | ||||||||||||| || | || ||| Sbjct 2544 TCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCTTG 2485 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||| || | || || ||||| ||||| ||||||||||| || || || || || Sbjct 2484 AGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGCC 2425 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 || | ||| ||| || ||| | |||| ||||||||| || ||||| || ||| Sbjct 2424 ACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCC 2365 Query 48335 TTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCG 48394 |||| ||||| | || |||||||| || || |||||| || ||| | || || Sbjct 2364 TTCTGCTTGACGACGGGGATCGTCTCGATAGCGTTGAAGAGAAACT--CACGCTGCTCCG 2307 Query 48395 TC-CGC-AACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTA 48449 | ||| | || || |||| ||| | |||| |||| ||||| | ||||| | Sbjct 2306 GCTCGCGGATGTACGTGTCGATGAGGAGC---GAGTACGTCTCCGAGTGGATGTTCTCCA 2250 Query 48450 TAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATC 48509 | ||||||||| ||||||||| | |||||| ||||||| || | | ||| | Sbjct 2249 TCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCTGCACCTCGGCGCTGAAGC 2190 Query 48510 TCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTT 48569 ||| | ||| ||||| ||||| || || || ||||||||||||||||| ||||| || Sbjct 2189 GCTCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGC 2130 Query 48570 TAAGGAAATGGCGCTCGTTGTGG---GTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | | || |||||||| |||| | || | | |||| | || | ||| || | Sbjct 2129 TCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAAGTCCTTCGAGA 2070 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 |||||| || || | |||||||| || || || || |||||||| Sbjct 2069 GGTCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 2021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931520806515200