Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq266 217 2e-50
seq788 187 3e-41
seq644 141 1e-27
seq386 122 1e-21
seq522 109 7e-18
seq382 96.9 4e-14
>seq266
Length=19737
Score = 217 bits (240), Expect = 2e-50
Identities = 281/390 (72%), Gaps = 15/390 (4%)
Strand=Plus/Plus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| |||||| |||||||||||||||| ||| | ||||||||||||||||| | |||||
Sbjct 13694 GCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTT 13753
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181
| | | ||||| ||||| || | ||| | ||| | || || | ||||| | |
Sbjct 13754 GCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAG 13813
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
|| || |||||||||| |||| ||| | ||| || |||||||||||||| || ||
Sbjct 13814 ACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACC 13873
Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301
||||||||||||| ||||||| ||| || ||||||||||| |||| |||| | |||
Sbjct 13874 CTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGT 13933
Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361
|||||| ||||| || || |||| ||| || || || | |||||| || |||
Sbjct 13934 GCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATGTAGTTGTA 13993
Query 1630362 GGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGC 1630421
|| ||| | ||| ||||| ||||| || || | | ||||| |||
Sbjct 13994 CGTCTCGATCGCGCTCGCCA------CGTCCTCG---------CCGTGGATGCCGACGGC 14038
Query 1630422 GACGCGCATGAGCATGTACTGGGGCCGCTC 1630451
||||||||||||||||| |||||| |||||
Sbjct 14039 GACGCGCATGAGCATGTGCTGGGGGCGCTC 14068
Score = 118 bits (130), Expect = 1e-20
Identities = 289/443 (65%), Gaps = 8/443 (2%)
Strand=Plus/Plus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221
||| || ||||| ||||| ||||| | | | |||| |||||||||| ||||||
Sbjct 13258 ACTCGATAATCTCCGTGCAGAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTAC 13317
Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281
| | |||| | | |||||||| || | | || ||| ||||| || ||||||
Sbjct 13318 TCTTGCGGTTCGCCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCT 13377
Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGC---GCGCGGCCCTNNN 1628338
||| ||| || |||| | || |||| | ||||| ||| ||||||||||
Sbjct 13378 CGAGGATAGCGTACCACAGCTTCTGCGC---CTTGACAGAGCGCTTGGCGCGGCCCTCGC 13434
Query 1628339 NNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCG 1628398
||||| || |||| ||||| || ||| || ||
Sbjct 13435 GCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCATAGCAGTCAGCCAGACCTGGGC 13494
Query 1628399 CCTCGGACGGACAAAAGAGCGACCAGTCGCCAC-CGGTCACCGCGCGGCGCATAAAGAGG 1628457
||||| || || | |||||||||||||| | || | | |||||||| || ||
Sbjct 13495 ACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTT-CGACACGGCGCATGAACAGA 13553
Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517
|| ||||||| || || ||||||||||| || ||||||||||| ||||||
Sbjct 13554 TCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTC 13613
Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577
|| || || | | || | || ||| | ||||||||||||||||||| ||||||
Sbjct 13614 TTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAG 13673
Query 1628578 GCGCCCTTGCGCTTGCCGCCGCC 1628600
|||||| ||||||| ||||||
Sbjct 13674 GCGCCCGGGCGCTTGTTGCCGCC 13696
Score = 91.5 bits (100), Expect = 2e-12
Identities = 109/148 (74%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGA 1627393
|||||||||| || || || | ||||| |||||| |||| |||||| | |||
Sbjct 12637 GGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACG 12696
Query 1627394 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 1627453
||| | |||| || ||| |||||||| ||| | |||||| |||||| ||||||
Sbjct 12697 GCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCA 12756
Query 1627454 CGAGGAGCGAGTTGCGCAGGCCGTGCTG 1627481
|| |||||||||||||| ||||||||
Sbjct 12757 TCAGCAGCGAGTTGCGCAGACCGTGCTG 12784
>seq788
Length=40807
Score = 187 bits (206), Expect = 3e-41
Identities = 216/289 (75%), Gaps = 3/289 (1%)
Strand=Plus/Minus
Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690
|||||||||||||||| || ||||||||||||||| ||| | |||| || | |
Sbjct 2267 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCT 2208
Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750
| ||||| |||| || || ||||||||||| ||||| ||||| || || |
Sbjct 2207 GCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAA 2148
Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCGACA--CCCAGT 869807
| || ||||||||||| | | |||||||||||| | |||| | | ||| ||||||
Sbjct 2147 AGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGT 2088
Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867
| ||| |||||||| ||||||||||||||||| ||||||||||||||| |
Sbjct 2087 CGTGCAAGTCCTTCGAGAGGTCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCT 2028
Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCG 869916
||||||||| ||| | | ||||||||||| |||||||||||||||||
Sbjct 2027 TGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAAGAGGACAAAGCG 1979
Score = 176 bits (194), Expect = 6e-38
Identities = 184/242 (76%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
|||||||| || ||| | ||||| |||||||||||||| | |||||||| |||||||||
Sbjct 2862 GCCTTGGCATAGTCGGCAACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATG 2803
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||| | || ||||||||||| | ||||| ||
Sbjct 2802 TTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAGGTTGACG 2743
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||| || |||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 2742 AGCAGGCGGTCCGCCACAAACTCAATGTACTGGCACATGAGGCGCGCGTTCATGCCGATC 2683
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|||| || |||| | || ||| ||| || | ||| || | || |||||| ||||
Sbjct 2682 AGCGAAACAGGCAAGGCGTCAGTCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATG 2623
Query 868931 AT 868932
||
Sbjct 2622 AT 2621
Score = 129 bits (142), Expect = 7e-24
Identities = 183/253 (72%), Gaps = 11/253 (4%)
Strand=Plus/Minus
Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275
|| || |||||||||||||||||||||||||| ||||||| | || ||||||||||
Sbjct 2511 AGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAA 2452
Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335
|||||||||||||||||||||||| | | || ||||| | || |||||| | ||
Sbjct 2451 AAGATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTCCGAGAA-----CGAGGCGCGCC 2397
Query 869336 TTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTC 869391
||| |||||| || ||||| |||||||| | | | | |||| || | ||| ||
Sbjct 2396 -TGTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGA-CGACGGGGATCGTCTC 2339
Query 869392 GATGGCGCGAAAGAGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAG 869451
||| ||| ||||| || | |||| || || || |||||||| |||||
Sbjct 2338 GATAGCGTTGAAGAGAAACTCACGCTGCTCCGGCTCGCGGATGTACGTGTCGATGAGGAG 2279
Query 869452 CGAATAGGTCTCC 869464
||| || ||||||
Sbjct 2278 CGAGTACGTCTCC 2266
>seq644
Length=45588
Score = 141 bits (156), Expect = 1e-27
Identities = 343/509 (67%), Gaps = 19/509 (4%)
Strand=Plus/Minus
Query 1726679 AAGGTATGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCAC-GCTCCCGTC 1726737
|||| |||||||| | | ||||| | || |||| || | ||||| || |||||
Sbjct 44789 AAGGCGTGCGGCTGCGACGACGCGCGGATCGCATCGACCGC-GACGCCAATGCCGCCGTC 44731
Query 1726738 GGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTG 1726797
|| |||||||||||| || | ||||| ||| ||||| | | ||||||||||| |||
Sbjct 44730 CGTAGAGTTCTTGAAGCCAATCGGCAGCGACAGGCCCGACACAAGCTCGCGGTGCAGCTG 44671
Query 1726798 GCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAGGGGC 1726857
||||||||| |||||||| | ||||||||||| ||| || | || || |||
Sbjct 44670 CGACTCGGTCGTACGCGCGCCGATCGCGCCCCACGCGTACAGATCCGACAGGTACTGGGG 44611
Query 1726858 CACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCG 1726917
| | | ||| | |||| ||||| ||| | | | || | | ||
Sbjct 44610 CGAGATCGTGTCGAGCACCTCGCACGCCACAGGCAGGCCAATCTCGTTAATG---TCAAT 44554
Query 1726918 CAACAGGCGGCGCGACGCCGT-CAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGG 1726976
|| ||| |||||| | || ||||||| | | || |||| |||||||||| |
Sbjct 44553 CAGCAGCTGGCGCG-CAATGTGCAGGCCGCGGTTGATCTGGAACGAGCCGTCGAGGTTCG 44495
Query 1726977 GGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGC- 1727035
||||| || ||| |||||||| |||||||||||||||||||| || | ||||| |||
Sbjct 44494 GGTCGTTGATCAGACCCTTCCAGCCGACGGTCGTGCGCGGCTTCTCAAAGTAGGCCCGCA 44435
Query 1727036 --ATGACCACGCAAAGCGCGT-CGCCGACCTCGTCTCGGACAAAGGCGC--GCAGGCGTC 1727090
|||||||| ||| | | | | | | || |||| | | | | |||||| |
Sbjct 44434 TAATGACCAC---AAGACCATCCTTCCAGCGCGCCTCG---TATGCCTCCTTCAGGCGGC 44381
Query 1727091 GGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGCA 1727150
| |||||||| ||||| | |||||||| ||| ||||| || || || |||||||
Sbjct 44380 GAGCATAGTCGCGCGCGGCCTCAGGGTCGTGGATCGAGCACGGGCCGACAATCACCAGCA 44321
Query 1727151 GCCGCCGGTCGGTCCCGTCGAGCACGCGC 1727179
| || ||| ||||| || ||| |||
Sbjct 44320 GGCGGTCGTCCTGCCCGTGGATCACACGC 44292
>seq386
Length=4060
Score = 122 bits (134), Expect = 1e-21
Identities = 323/478 (68%), Gaps = 45/478 (9%)
Strand=Plus/Minus
Query 733076 GCGCCAGCCCGAGTTGGGCGACAAACTGTCGTCGCGCCACGGCCAAAAGGGC-ACCGTGG 733134
||| | ||| ||| |||||||||| | |||||||||||||||||||||||| ||||
Sbjct 865 GCGGCGGCCAGAGCTGGGCGACAAGTTCTCGTCGCGCCACGGCCAAAAGGGCGTGTGTGG 806
Query 733135 GCAGCGTGCGCTCCACCGAGGACATGCCCTGGTCGCCGCGCGGCGG-CGCCACGCCCGAC 733193
| | || || || |||||| |||| | || ||| || ||| |||| ||||||
Sbjct 805 TCTGATTGTGCCGCA-GGAGGACCTGCC--GTTCACCG-ACGACGGTATCCAC-CCCGAC 751
Query 733194 ATCGTGATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGCTCGAGGCC 733253
||| | || ||||| |||| | |||||||||| ||||| | ||||||||| |||||
Sbjct 750 ATCATCATGAACCCCCACGGCTTCCCGTCGCGTATGACGGTCGGCAAGATGATCGAG--- 694
Query 733254 CTCCTG---GGCAAGG-TGGCCTGCCGCGAGGGCTACATCGGCGACGGCACGCCCTTTGG 733309
|| ||| ||||||| || || ||| |||| | |||||||| |||| ||
Sbjct 693 CTGCTGGCCGGCAAGGCCGGTGTG-ATCGATGGCTCGCTGCAGTACGGCACGGCCTTCGG 635
Query 733310 CGGCGTCACCNNNNNNNNNNNNNNNNNNGAGTTGGCCCGC-CACGGGTGCGAGC---GCT 733365
|||| || | || |||||||| | |||| ||| |||
Sbjct 634 CGGC-TCGC-----------GCGTCGAGGATATGGCCCGCATCCTCGTGC-AGCACGGCT 588
Query 733366 AC---------GGCAAGGAGGTGCTCTACCACCCGCAC-ACCGGCGAGCCCATGGCGGCG 733415
|| ||||| ||| ||| || | | |||| ||||| || || | | ||||
Sbjct 587 ACAACTACGGTGGCAAAGAGTACCTC-ACGAGCGGCACGACCGGTGAACCGCTCGAGGCG 529
Query 733416 TTGATCTTCTCGGCGCCGGTCTACTACCAGGCCCTCCGGCACGTGGCCATCGACAAGATC 733475
| | | || | ||| ||||||||||| ||| |||| ||| ||| ||||||||
Sbjct 528 TACGTGTACTTTGGCCCGATCTACTACCAGAAGCTCAAGCACATGGTCATGGACAAGATG 469
Query 733476 CACGCGCGCCCGCGCGGTCC-CGTGCAGATGCTCACCAAGCAGCCGGTCGAGGGCCGC 733532
||||||||| ||||||| || ||||| | ||||||| |||||| |||||| |||
Sbjct 468 CACGCGCGCGCGCGCGGACCGCGTGCCG-TGCTCACGCGCCAGCCGACCGAGGGACGC 412
>seq522
Length=54502
Score = 109 bits (120), Expect = 7e-18
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 1254350 CAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTT 1254409
||| ||||| | | |||| || || || ||||||||||| |||| ||| ||| |
Sbjct 49007 CAGCTCGCCAGGGAGAATCAAACGAACAGCCGTCTGGATCTCACGCGAAGAGATGGTGCT 49066
Query 1254410 GCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1254469
|||||| || ||||| |||||||||| ||||||| |||| ||||| |
Sbjct 49067 CTTCTTGTTGTAGCTGGCCAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAGATGTCCTG 49126
Query 1254470 GACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1254529
|| |||||||| | | | ||| | |||||| ||||| || |||||||||||||||
Sbjct 49127 CACGAACGAGTTGAGAATGGCCATGGCCTTGTTCGAGATACCAGTGTCGGGGTGCACCTG 49186
Query 1254530 CTTGAGCACCTTGTAGATGAACGACGAGTA 1254559
|||||| || ||||||| | | ||||||
Sbjct 49187 CTTGAGGACACGGTAGATGTAGGTCGAGTA 49216
>seq382
Length=4175
Score = 96.9 bits (106), Expect = 4e-14
Identities = 163/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 1574004 GGCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCG 1574063
||| ||||||| |||||||| | |||||| || |||| | | ||||||
Sbjct 2882 GGCATCGACGTTGTGCGCAACAAGATCAAGGTGTTTGCGCAGAAGAAGGTGTCGCTGCCG 2823
Query 1574064 CCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAG 1574123
|| || |||||| | ||||| ||||||||||| ||| || | ||| ||| || |||
Sbjct 2822 CCGAACCGGCACAAGATCATCATTCTCGACGAGGCGGACAGCATGACGCCGGGTGCGCAG 2763
Query 1574124 CAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGC 1574183
||||| ||||| ||| ||||| | || | ||||||||||| | | ||||||
Sbjct 2762 CAGGCGCTGCGTCGCACGATGGAGATCTACGCGCCAACGACGCGCTTCTGCTTTGCGTGC 2703
Query 1574184 AACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTT 1574239
||| |||| | | |||| ||| | |||| || ||||| || ||||| || ||
Sbjct 2702 AACCAGTCGAACAAGATCATTGAGCCGATCCAGAGCCGCTGTGCGATTCTTCGGTT 2647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107054673376510
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