Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1023 136 5e-27 >seq1023 Length=24217 Score = 136 bits (150), Expect = 5e-27 Identities = 348/526 (66%), Gaps = 43/526 (8%) Strand=Plus/Minus Query 147013 GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTC 147072 || ||||| | |||||| || |||||||| || || |||||||||| ||| | ||| | Sbjct 15826 GTCAGCAGAGCGTAGCTTGCAATGTTGAACGGCACACCCAGGCCCAGGTCACACGAACGT 15767 Query 147073 TGGTACAGCTGGCACGAGAG-----------CTCCCCGT--------------CG----- 147102 ||||||| ||||| || || ||||| || || Sbjct 15766 TGGTACATTTGGCAAGAAAGACGCGGCTTTTCTCCCTGTGCCTTCTCTGCCTCCGTGGGA 15707 Query 147103 ---GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCC 147159 | |||| | |||||||| || || || || || || ||||||||| | ||| || Sbjct 15706 AGCGACACGAAGAACTGGCAGAGAATATGACAAGGTGGAAGCGCCATGTTGTCCAGATCG 15647 Query 147160 GCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCG 147219 ||||||||| || | | | |||| | | |||||| |||| || | |||| Sbjct 15646 ATGGGGTTCCATGCGCTCAGTAAAATGCGCCGGTCCGTTGGGTTCGTCTTGATTTGTTCG 15587 Query 147220 ATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCC-GCAGTCCACGTA 147278 || || || || || || ||||| ||| |||||| || | ||| ||||| || Sbjct 15586 ATGACGTGGGCGAGTTGATCGACACCCTGACCCTGGTAGTTGGTATCAGCA-TCCACATA 15528 Query 147279 CCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCT 147338 | | || |||||||| | ||| ||||||||||||||||| |||||||| || | Sbjct 15527 CTTCGCGCCAAAGTGGCGCCATTGGAAGCCGTACACTGGACCCAGGTCACCTTCACGGCG 15468 Query 147339 GTGCGAGAAGCCCGC-CCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGA--TGCC 147395 |||| ||| |||| | || ||||| |||| ||| || | | | ||||||| || Sbjct 15467 GTGC-CCAAGTCCGCGCTTCTGCAGAAATTCGGTGGAACCATTGCCATCCCAGATGTGTA 15409 Query 147396 CACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCG-GATGAACCAGAGCAGCT 147454 || | | || | |||| |||||||||||| | |||| | |||||||| ||||||| Sbjct 15408 CATTTCGTT--CACTGAGCCACTTAGAGTCCGT-GCGCCCGGCAATGAACCACAGCAGCT 15352 Query 147455 CCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 | |||| || || | ||||||| | ||| || |||| ||||| Sbjct 15351 CTTCCAGCACGCCACGGTAAAAGACACGCTTCGTTGTCAAAAGGGG 15306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583480487592000