Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq266 114 4e-20 seq788 93.3 1e-13 >seq266 Length=19737 Score = 114 bits (126), Expect = 4e-20 Identities = 237/350 (68%), Gaps = 12/350 (3%) Strand=Plus/Minus Query 254954 ACGAACGGACGGAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGC 255013 |||||||| |||| ||| ||| | || ||| |||| |||| ||||||| ||| ||| Sbjct 13768 ACGAACGGTGTGAGCAACGGTATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGC 13709 Query 255014 TACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGG 255073 ||||| || || || ||| ||| ||||| || || || | |||||||||||||||||| Sbjct 13708 TACGTGGACCAGGGCGGCAACAAGCGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGG 13649 Query 255074 CACGCCGAC---ATTGAACGGTTTTTACTGCTGTCCGACAAGACC---GGCACCGAGGAG 255127 ||| | ||| ||||| |||| || | | || ||||| | |||| ||||| Sbjct 13648 CACTCGGACGTTTTTGAA-----TTTATTGATCTGCG-CAAGAACCATGGCAAGGAGGAA 13595 Query 255128 CTGATCGCCCGCGACATCTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTG 255187 || ||| |||||| | | | || | ||| ||||||||| ||||| || || Sbjct 13594 GTGCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGCGCCGTGTC 13535 Query 255188 GAACGAGACGAGACCTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCT 255247 |||| ||| |||| || ||||| ||| | | || ||||| | |||| Sbjct 13534 GAACAGAACGGCGACTGGTCGCTGATGTGCCCCGCCGAGTGCCCAGGTCTGGCTGACTGC 13475 Query 255248 TGGGGTGACGAGTTTGAAAAACTGTATCTGGAGTACGAGCGTGCCGGCCG 255297 | || || |||||||| ||||| | |||||||||| | ||||| Sbjct 13474 TATGGCGAGGAGTTTGATGCTCTGTACGAGAAGTACGAGCGCGAGGGCCG 13425 >seq788 Length=40807 Score = 93.3 bits (102), Expect = 1e-13 Identities = 394/607 (65%), Gaps = 19/607 (3%) Strand=Plus/Plus Query 443270 GCGGTTCGTCTTGTTCCCCGTTCAGCATCC-CGACATCTACGACATGTACAA-ACGACAA 443327 ||| || ||| | ||||| | || || || ||| |||| | |||||||| | | | Sbjct 1978 GCGCTTTGTCCTCTTCCC-GATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCC- 2035 Query 443328 GTGGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAAC 443387 | |||| ||| |||||| |||||||| || ||||| ||||||||| ||| ||| || Sbjct 2036 GAGGCCTCGTTCTGGACCGCCGAGGAGATGGACCTCTCGAAGGACTTGCACGACTGGGAC 2095 Query 443388 GAACGACT-ATCTAGCCATGAACGCGATTTCTTCAAATGCATCTTGGCCTTCTTTGCACC 443446 | || | | | | | |||| ||| | || | | | || ||||||||||||| | Sbjct 2096 CACCGCATGAACGA-CAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGC 2154 Query 443447 GAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACAC 443506 |||||||||||| ||||| ||||| ||| ||| || ||| | | | Sbjct 2155 TTCGGACGGTATCGTCAACGAGAACCTGGTCGAGCGCTTCAGCGCCGAGGTGCAGGCCGC 2214 Query 443507 CGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTA 443566 ||||||||||| |||||||| ||||| | ||||||||||| ||| | ||| || Sbjct 2215 CGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTA 2274 Query 443567 CAGTCAGTTGATCAAGACAC-TAATTCCGAACGAAGACGAACAGCG---GTCCATCTTCT 443622 | | | ||| ||||| || |||| ||| || ||||| || ||||| Sbjct 2275 CTCGCTCCTCATC--GACACGTACATCCG--CGAGCCGGAGCAGCGTGAGTTTCTCTTCA 2330 Query 443623 CATCGTTCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGG--CT 443680 | || ||| | || | | ||| | ||| | ||||| | ||| || Sbjct 2331 ACGCTATCGAGACGATCCCCGTCGTCAAGCAGAAGGCCGAGTGGGCCCTGCGCTGGATCT 2390 Query 443681 CGAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACT 443740 || || | ||| ||| ||||| || || || ||||| | ||||| || | Sbjct 2391 CGGACAGGCGCGCCTC--GTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCAT 2448 Query 443741 GTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACG 443800 || ||| ||| | || ||||||||||||||| | || ||||| || || |||| | Sbjct 2449 CTT-TTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTG 2507 Query 443801 GTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCT 443860 ||||| | || ||||| || ||| || || ||||| |||| |||||| |||| Sbjct 2508 GTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCCT 2567 Query 443861 GTCTTCT 443867 |||| || Sbjct 2568 GTCTCCT 2574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588315038928350