Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq266 167 3e-36 >seq266 Length=19737 Score = 167 bits (184), Expect = 3e-36 Identities = 604/932 (65%), Gaps = 25/932 (3%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || || || || |||| ||||| ||||| ||||| ||| ||||||| | | Sbjct 13206 GGCAGCGCAATCGACGCCAGGTTGCACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATA 13265 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || ||||| ||||| |||| ||||| ||||||||||| | Sbjct 13266 ATCTCCGTGCAGAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGG 13325 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || |||||||| || | | || | |||||||| | || | | ||| ||| Sbjct 13326 TTCGCCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGATA 13385 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 || | ||| | | || ||| || | ||| | ||||| || ||||| ||||||||| Sbjct 13386 GCGTACCACAGCTTCTGCGCCTTG-ACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTT 13444 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTG 111527 ||| || || ||||||||||| ||| || ||| | |||||||| || | | | Sbjct 13445 CTCGTACAGAGCATCAAACTCCTC-GCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGG 13503 Query 111528 GACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 111587 | || | || ||||| | || | || || || |||||| || || ||||||| Sbjct 13504 GGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCC 13563 Query 111588 ACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACT 111647 |||| | || || || | || | || || | || ||||| || | | Sbjct 13564 ACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGAT 13623 Query 111648 CAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC---- 111703 ||| || || | | |||| |||||| ||||| || |||| || | | ||| Sbjct 13624 CAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGC 13683 Query 111704 ---TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 111760 | | | ||||| || | || |||||||| ||| ||| | ||||| ||||| Sbjct 13684 GCTTGTTGCCGCCC----TGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATG 13739 Query 111761 GGAATAATACCATCTGAT-TGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTC 111817 || | |||||| | || | ||| || || || ||| |||||| | || | Sbjct 13740 GGCACAATACCGT-TGCTCACACCGTTCGTGCCGGCGATGTACGAG--CCCGTCGCACGA 13796 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | | ||||||| || |||||||| || ||| ||| ||| |||||| | | Sbjct 13797 ATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTG 13856 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 || || | || ||||| | ||| ||||| ||||| | | ||||||||| ||| Sbjct 13857 AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 13916 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 || || || | || || || |||||||| ||||| || | ||||| || | | ||| Sbjct 13917 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTG--TGTAAAGGCCT 13974 Query 111998 --TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 112055 | |||||| | || ||| ||||| | | | | ||| || ||||||||||||| Sbjct 13975 TCTCGGACATGTAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 14034 Query 112056 TTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAA 112115 ||||| ||||||| ||||| ||| ||| ||| | |||||| || ||| | | Sbjct 14035 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGATCCGCAGCA 14094 Query 112116 GATAGCTCTTCTCAAGGGTTTTGAGACCAAAG 112147 | ||| ||| || || |||| |||||| Sbjct 14095 GGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAG 14126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628023914088000