Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq478 280 4e-70 seq810 93.3 1e-13 seq1017 87.8 5e-12 >seq478 Length=55648 Score = 280 bits (310), Expect = 4e-70 Identities = 942/1446 (65%), Gaps = 33/1446 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| ||||| || || |||||||| || || ||||| || || ||| Sbjct 28193 GCTGTTGGTATTGATTTGGGTACCACCTACTCTTGTGTGGCCGTCTGGCAGAACGACCGT 28134 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || |||||| | || || || || |||||||| || ||| Sbjct 28133 GTCGAGGTCATTGCCAACGACCAGGGTAACCGTACGACTCCTTCGTACGTTGCCTTCACC 28074 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||| |||||| | || || || || | ||| || || | || Sbjct 28073 GACACGGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTGGCTATGAACCCCCACAAC 28014 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437 || || || || || ||||| || |||||| | ||||| | |||| || || Sbjct 28013 ACTGTCTTCGACGCCAAGCGTCTGATTGGTCGCAAGTTCAAC-GACACTGAGGTTCAGTC 27955 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGG---TGATAAACCAATTAT 349494 ||| | || || | || || | || || ||| | || ||| || |||| Sbjct 27954 GGATATGAAGCACTGGCCGTTCTCGGTCATT------GACCGCTCTGGTAAGCCCGTTAT 27901 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATG 349552 || ||||| || ||||| | || || || || | || ||||| || || ||| Sbjct 27900 CCGCGTCGAATACAAGGGTGAGGAGAAG--ATCTTCACTCCTGAGGAAATCTCCTCGATG 27843 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG-TGAAACAGTAACTGATGC 349611 || | |||| ||| || | ||||| || || | || | || || | ||||| Sbjct 27842 GTCCTGCTTAAGATGCGTGAGACCGCTGAGGCTTACCTTGGCTCGGAC-GTGAAGGATGC 27784 Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671 ||| | ||||| || ||||| || || || | ||||| || || || || ||||| Sbjct 27783 TGTGGTGACTGTCCCGGCCTACTTCAACGACTCGCAGCGCCAGGCTACCAAGGACGCTGG 27724 Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731 |||||||| | ||||| | | || ||||| || || || ||||| || ||||| Sbjct 27723 TGTGATTGCGGGTCTCAATGTCATGCGTATCATTAACGAGCCTACGGCTGCTGCTATTGC 27664 Query 349732 ATATGGGCTTGATAA-AATGA-GTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || || | | || |||| || || ||||| || || | ||| Sbjct 27663 CTACGGTCTCGACAAGAAGGACGAGTCCGAGAAGAATGTA--CTTATCTTCGACCTGGGT 27606 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || | || ||||| || || || ||||| || Sbjct 27605 GGTGGTACTTTCGATGTGTCGCTCCTGACGATCGAGGAGGGTATCTTCGAGGTTAAGGCT 27546 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || || ||||| || || |||||||| || || ||||| || ||||| || || ||| Sbjct 27545 ACCGCGGGTGACACGCACCTTGGTGGTGAGGACTTTGACAACCGTCTTGTGAACCACTTT 27486 Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATC-CTAGAGCAATGC 349967 || | || || ||||| |||| || | ||| || | || | || | || ||| Sbjct 27485 GTGCAGGAGTTCAAGCG-CAAGAACAAGAAGGAT-CTGACCACAAACGCTCGTGCTCTGC 27428 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027 |||| || | ||||| | || ||||||||||| | | || || || |||| ||| Sbjct 27427 GTCGTCTGCGCACTGCTTCGGAGCGTGCTAAGCGCACTCTCTCGTCGGCTGCCCAGACCA 27368 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 | ||||| ||||| || || ||| || | || |||| |||||||||| ||||| | Sbjct 27367 CCATTGAGATTGACTCGCTCTTTGAGGGTATTGACTTCTACACATCTATTACTCGTGCCC 27308 Query 350088 GGTTTGAAGAATTATGTATGGATCT-TTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146 | || || || | || || || || | | | || || || ||||| || || || Sbjct 27307 GTTTCGAGGAGCTTTGCGGTGACCTCTTCTCGCAC-ACCATTGACCCTGTCGAGAAGGTC 27249 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 | ||||| || || ||| | | | | || | || | |||||||| || Sbjct 27248 CTCCGTGATGCCAAGATCGACAAGGGTTCGGTCAACGAGATTGTGCTGGTTGGTGGCTCG 27189 Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266 || |||||||| || || || | || || || || || ||| || || Sbjct 27188 ACTCGTATTCCTCGCGTGCAGAAGCTCCTTCGCGACTTCTTCAACGGCCGCGAGCCCAAC 27129 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 | || || || || || || || ||||| || |||||||| || ||||| | ||| | Sbjct 27128 AAGTCTATCAACCCTGACGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATTCTG 27069 Query 350327 TCTGGAAATAAGAGTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383 || || | | | ||| || | | ||||| | || || ||||| | || ||| Sbjct 27068 TCCGG---TGACACTTCGGAGAAGACGCAGGATCTGCTGCTGCTCGATGTCGCCCCTCTT 27012 Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443 ||| | || | || || | |||| || | ||| ||| || | || | ||| Sbjct 27011 TCGATGGGTATCGAGACCGCCGGTGGTGTCTTCACTCCTCTGATCAAGCGCAACACGACT 26952 Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503 || ||||| || ||||| | || || || | ||| || || ||||| | || Sbjct 26951 GTGCCTACGAAGAAGTCGGAGGTCTTCTCGACGTATGCCGACAACCAGCCTGGTGTGCTG 26892 Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563 || || || || || ||||| ||||| ||||| || || || || || || | ||| Sbjct 26891 ATCCAGGTGTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTGGGTAAGTTT 26832 Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623 || | ||||| || ||| | || |||||||||||||| ||| |||||||| Sbjct 26831 GAGCTTTCGGGTATTCCCCCGGCTCCTCGTGGTGTTCCTCAGATTGAGGTCACTTTCGAT 26772 Query 350624 ATTGAT 350629 | ||| Sbjct 26771 GTCGAT 26766 >seq810 Length=126407 Score = 93.3 bits (102), Expect = 1e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||||| | ||||| || ||||||||||| | ||| |||||||| |||| Sbjct 12787 ATGTAACCAGTTTCAGCTGTTTTCACAGCAGTATCAATCAGACCTTCACGACCAGCCATG 12846 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 ||||||||||| |||||| | ||||| || | || | | ||| |||||| ||| ||| Sbjct 12847 GCATGGAAGAAGAATTCATGCGCTGTAAGACCTCGAAGATACGAATTCTCAACAAAGCCT 12906 Query 378352 C 378352 | Sbjct 12907 C 12907 >seq1017 Length=27640 Score = 87.8 bits (96), Expect = 5e-12 Identities = 220/333 (66%), Gaps = 5/333 (2%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| | ||||| || || | || | | || || | ||||| ||||| Sbjct 14717 AAGATGAAGGAGACCGCTGAGGCTTACCTGGGCCACAAGGTCACCCACGCTGTCGTTACT 14658 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| || ||||| |||||||| || || || || || || | || || Sbjct 14657 GTGCCGGCCTACTTCAATGACGCCCAGCGCCAGGCCACCAAGGACGCCGGTACGATCGCA 14598 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | | || || | || | || || ||||| || || || || || || || || Sbjct 14597 GGTCTCGAGGTCCTCCGCATTGTGAACGAGCCCACCGCGGCTGCCATCGCCTACGGTCTG 14538 Query 349742 GATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 || || || ||| | || | || || | | ||| | ||||||||||| || Sbjct 14537 GACAAGAAGGAGGGC----GAGTCGCAGATCATTGTGTATGACCTGGGTGGTGGTACCTT 14482 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860 |||||| || || || || |||| ||| | ||||| || || || |||||||| Sbjct 14481 TGATGTCTCGCTTCTGACCATTGACTCGGGTGTGTTTGAGGTGCTTGCTACGGCTGGTGA 14422 Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 || ||||| ||||| || || ||||| || || Sbjct 14421 CACTCATCTCGGTGGTGAGGACTTTGACAACCG 14389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515234403377090