Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq478 280 4e-70
seq810 93.3 1e-13
seq1017 87.8 5e-12
>seq478
Length=55648
Score = 280 bits (310), Expect = 4e-70
Identities = 942/1446 (65%), Gaps = 33/1446 (2%)
Strand=Plus/Minus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||| | || || ||||| ||||| || || |||||||| || || ||||| || || |||
Sbjct 28193 GCTGTTGGTATTGATTTGGGTACCACCTACTCTTGTGTGGCCGTCTGGCAGAACGACCGT 28134
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| || | ||||| || || || |||||| | || || || || |||||||| || |||
Sbjct 28133 GTCGAGGTCATTGCCAACGACCAGGGTAACCGTACGACTCCTTCGTACGTTGCCTTCACC 28074
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || |||||| |||| |||||| | || || || || | ||| || || | ||
Sbjct 28073 GACACGGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTGGCTATGAACCCCCACAAC 28014
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437
|| || || || || ||||| || |||||| | ||||| | |||| || ||
Sbjct 28013 ACTGTCTTCGACGCCAAGCGTCTGATTGGTCGCAAGTTCAAC-GACACTGAGGTTCAGTC 27955
Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGG---TGATAAACCAATTAT 349494
||| | || || | || || | || || ||| | || ||| || ||||
Sbjct 27954 GGATATGAAGCACTGGCCGTTCTCGGTCATT------GACCGCTCTGGTAAGCCCGTTAT 27901
Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATG 349552
|| ||||| || ||||| | || || || || | || ||||| || || |||
Sbjct 27900 CCGCGTCGAATACAAGGGTGAGGAGAAG--ATCTTCACTCCTGAGGAAATCTCCTCGATG 27843
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG-TGAAACAGTAACTGATGC 349611
|| | |||| ||| || | ||||| || || | || | || || | |||||
Sbjct 27842 GTCCTGCTTAAGATGCGTGAGACCGCTGAGGCTTACCTTGGCTCGGAC-GTGAAGGATGC 27784
Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671
||| | ||||| || ||||| || || || | ||||| || || || || |||||
Sbjct 27783 TGTGGTGACTGTCCCGGCCTACTTCAACGACTCGCAGCGCCAGGCTACCAAGGACGCTGG 27724
Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731
|||||||| | ||||| | | || ||||| || || || ||||| || |||||
Sbjct 27723 TGTGATTGCGGGTCTCAATGTCATGCGTATCATTAACGAGCCTACGGCTGCTGCTATTGC 27664
Query 349732 ATATGGGCTTGATAA-AATGA-GTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789
|| || || || || || || | | || |||| || || ||||| || || | |||
Sbjct 27663 CTACGGTCTCGACAAGAAGGACGAGTCCGAGAAGAATGTA--CTTATCTTCGACCTGGGT 27606
Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849
||||||||||| ||||| || || || || | || ||||| || || || ||||| ||
Sbjct 27605 GGTGGTACTTTCGATGTGTCGCTCCTGACGATCGAGGAGGGTATCTTCGAGGTTAAGGCT 27546
Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909
|| || ||||| || || |||||||| || || ||||| || ||||| || || |||
Sbjct 27545 ACCGCGGGTGACACGCACCTTGGTGGTGAGGACTTTGACAACCGTCTTGTGAACCACTTT 27486
Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATC-CTAGAGCAATGC 349967
|| | || || ||||| |||| || | ||| || | || | || | || |||
Sbjct 27485 GTGCAGGAGTTCAAGCG-CAAGAACAAGAAGGAT-CTGACCACAAACGCTCGTGCTCTGC 27428
Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027
|||| || | ||||| | || ||||||||||| | | || || || |||| |||
Sbjct 27427 GTCGTCTGCGCACTGCTTCGGAGCGTGCTAAGCGCACTCTCTCGTCGGCTGCCCAGACCA 27368
Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087
| ||||| ||||| || || ||| || | || |||| |||||||||| ||||| |
Sbjct 27367 CCATTGAGATTGACTCGCTCTTTGAGGGTATTGACTTCTACACATCTATTACTCGTGCCC 27308
Query 350088 GGTTTGAAGAATTATGTATGGATCT-TTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146
| || || || | || || || || | | | || || || ||||| || || ||
Sbjct 27307 GTTTCGAGGAGCTTTGCGGTGACCTCTTCTCGCAC-ACCATTGACCCTGTCGAGAAGGTC 27249
Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206
| ||||| || || ||| | | | | || | || | |||||||| ||
Sbjct 27248 CTCCGTGATGCCAAGATCGACAAGGGTTCGGTCAACGAGATTGTGCTGGTTGGTGGCTCG 27189
Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266
|| |||||||| || || || | || || || || || ||| || ||
Sbjct 27188 ACTCGTATTCCTCGCGTGCAGAAGCTCCTTCGCGACTTCTTCAACGGCCGCGAGCCCAAC 27129
Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326
| || || || || || || || ||||| || |||||||| || ||||| | ||| |
Sbjct 27128 AAGTCTATCAACCCTGACGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATTCTG 27069
Query 350327 TCTGGAAATAAGAGTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383
|| || | | | ||| || | | ||||| | || || ||||| | || |||
Sbjct 27068 TCCGG---TGACACTTCGGAGAAGACGCAGGATCTGCTGCTGCTCGATGTCGCCCCTCTT 27012
Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443
||| | || | || || | |||| || | ||| ||| || | || | |||
Sbjct 27011 TCGATGGGTATCGAGACCGCCGGTGGTGTCTTCACTCCTCTGATCAAGCGCAACACGACT 26952
Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503
|| ||||| || ||||| | || || || | ||| || || ||||| | ||
Sbjct 26951 GTGCCTACGAAGAAGTCGGAGGTCTTCTCGACGTATGCCGACAACCAGCCTGGTGTGCTG 26892
Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563
|| || || || || ||||| ||||| ||||| || || || || || || | |||
Sbjct 26891 ATCCAGGTGTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTGGGTAAGTTT 26832
Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623
|| | ||||| || ||| | || |||||||||||||| ||| ||||||||
Sbjct 26831 GAGCTTTCGGGTATTCCCCCGGCTCCTCGTGGTGTTCCTCAGATTGAGGTCACTTTCGAT 26772
Query 350624 ATTGAT 350629
| |||
Sbjct 26771 GTCGAT 26766
>seq810
Length=126407
Score = 93.3 bits (102), Expect = 1e-13
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291
|| |||||||||| | ||||| || ||||||||||| | ||| |||||||| ||||
Sbjct 12787 ATGTAACCAGTTTCAGCTGTTTTCACAGCAGTATCAATCAGACCTTCACGACCAGCCATG 12846
Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351
||||||||||| |||||| | ||||| || | || | | ||| |||||| ||| |||
Sbjct 12847 GCATGGAAGAAGAATTCATGCGCTGTAAGACCTCGAAGATACGAATTCTCAACAAAGCCT 12906
Query 378352 C 378352
|
Sbjct 12907 C 12907
>seq1017
Length=27640
Score = 87.8 bits (96), Expect = 5e-12
Identities = 220/333 (66%), Gaps = 5/333 (2%)
Strand=Plus/Minus
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621
|| |||||||| | ||||| || || | || | | || || | ||||| |||||
Sbjct 14717 AAGATGAAGGAGACCGCTGAGGCTTACCTGGGCCACAAGGTCACCCACGCTGTCGTTACT 14658
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681
|| || ||||| || ||||| |||||||| || || || || || || | || ||
Sbjct 14657 GTGCCGGCCTACTTCAATGACGCCCAGCGCCAGGCCACCAAGGACGCCGGTACGATCGCA 14598
Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741
|| | | || || | || | || || ||||| || || || || || || || ||
Sbjct 14597 GGTCTCGAGGTCCTCCGCATTGTGAACGAGCCCACCGCGGCTGCCATCGCCTACGGTCTG 14538
Query 349742 GATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800
|| || || ||| | || | || || | | ||| | ||||||||||| ||
Sbjct 14537 GACAAGAAGGAGGGC----GAGTCGCAGATCATTGTGTATGACCTGGGTGGTGGTACCTT 14482
Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860
|||||| || || || || |||| ||| | ||||| || || || ||||||||
Sbjct 14481 TGATGTCTCGCTTCTGACCATTGACTCGGGTGTGTTTGAGGTGCTTGCTACGGCTGGTGA 14422
Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCG 349893
|| ||||| ||||| || || ||||| || ||
Sbjct 14421 CACTCATCTCGGTGGTGAGGACTTTGACAACCG 14389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515234403377090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |