Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq266 224 1e-53 seq644 156 5e-33 seq388 152 6e-32 seq342 147 2e-30 seq353 129 7e-25 seq788 123 3e-23 >seq266 Length=19737 Score = 224 bits (248), Expect = 1e-53 Identities = 929/1440 (65%), Gaps = 74/1440 (5%) Strand=Plus/Plus Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415 ||||| || || || || |||| || | ||| | ||||| |||||||| |||| Sbjct 12651 AACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCG 12710 Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475 ||| || ||||||||| |||| ||||||||||| || | | || ||| || || Sbjct 12711 TTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATCAGCAGCGAGTTG 12770 Query 80476 CGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTGA---CCAAAAATCAACCCCA 80529 ||||| ||||||| || | ||| | || | | | ||| | || | | Sbjct 12771 CGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCACAGGTC--CGACG 12828 Query 80530 ACGCTGTGACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAAC 80589 || || | ||||||||||| ||||| || ||||| ||| || || ||| || || Sbjct 12829 GCG-TGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAGGGCTGCCCTCGTAC 12887 Query 80590 GTCTCGTACGGGCC--CTCCGTCTTGGCCAGCTCACA----CGACTCCATAAGGGCCGCG 80643 |||||||| | ||| | || | |||||||| || || |||| | |||||| Sbjct 12888 GTCTCGTATGTGCCATATTCGGC--CGCCAGCTCGCAGCTGCG-CTCC---AAGGCCGCA 12941 Query 80644 TGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGAC 80703 || |||||| |||||||| | |||| |||||||| || |||||||| Sbjct 12942 TGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCTGTCGAACGGA 13001 Query 80704 AAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGG 80763 ||||||| ||||||||| | || || |||||||| || ||||| |||| |||||||| Sbjct 13002 TAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGGGCGGTGC 13061 Query 80764 CGCTTGTTCGATCGCTCGGC---CTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGG 80820 ||| ||||||| || || |||| | ||||| |||| ||||||||| |||| Sbjct 13062 CGCATGTTCGAGCGACGTGCACTCTCC---ACAGGGTAGTAGTTGATATCGATGATGCGG 13118 Query 80821 TTCAGGTTGCGTGTA-ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTT 80879 |||||||| | || | || || | || || || || || |||| | || || Sbjct 13119 TTCAGGTT-CTTGCACACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTATGTCTT 13177 Query 80880 C------------CCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGC 80927 | |||| | ||| | ||| || | |||||||| |||||||| || Sbjct 13178 CGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGTTGCACACAGC 13237 Query 80928 CACCTCTTCAG--CATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATT 80985 ||| || | | |||| |||||| || |||||||| | || || ||| || Sbjct 13238 TGTCTCGTCCGGCGAGCTGT--ACTCGATAATCTCCGTGCAGAGGTTCGAGCTCTTGATC 13295 Query 80986 GTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT--AGCACATGTACG 81043 || |||||||| |||||||| |||| ||| | |||||||| || ||| | | Sbjct 13296 GTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACA--AAAG 13353 Query 81044 GGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGAC-- 81101 | | || ||||| | || | || |||||| |||| ||| | || |||||||||| Sbjct 13354 GATTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTGACAG 13413 Query 81102 --CACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCA 81159 | | | ||| ||| ||| | | ||||| |||| | || |||| | Sbjct 13414 AGCGCTTGGCG----CGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCTCG 13469 Query 81160 CCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTC 81218 || | | || |||| || ||||||||||| ||||||||||| ||||||| || Sbjct 13470 CCATAGCAG-TCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTT 13528 Query 81219 GTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCA 81278 | || ||| |||||| || || ||||| || || |||||||||||| Sbjct 13529 CTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGC 13588 Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338 |||| | ||||| | || ||||| ||||| || | ||| || | | ||||| || Sbjct 13589 GCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTG 13648 Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395 ||| |||||||| || | || | | ||| ||| ||| ||||||| ||||| Sbjct 13649 CCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTA 13708 Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCAT--CTGACTGACCGTTC 81453 || || || ||| | || || | ||| || | ||||| | || || ||||||| Sbjct 13709 GCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCAC--ACCGTTC 13766 Query 81454 GTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCT 81513 || || |||| ||| ||| | || || | ||| ||| ||||| || || || Sbjct 13767 GTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCG 13826 Query 81514 GACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCT 81573 | | ||| ||| ||||| || | || || || || |||||||| || Sbjct 13827 GCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCGAGTCG 13886 Query 81574 TTTTTCAT-GTCAAGCAA-GAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGA 81631 | ||||| ||| ||| ||| || ||||| || ||| | | ||||||||||| Sbjct 13887 TCCTTCATACTCA--CAAGGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGCATTGA 13944 Query 81632 ACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTT--GACATCAGGTCATAGGTTTCCTT 81689 |||| || || | |||||| || || | | | ||||| || || || || | Sbjct 13945 ACAGGGTCGGCGACGCGTG--TGTAAAGGCCTTCTCGGACATGTAGTTGTACGTCTCGAT 14002 Query 81690 GACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 ||| | | || || ||||| || |||| || || ||||| | ||||| |||||| Sbjct 14003 CGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGGGG 14062 >seq644 Length=45588 Score = 156 bits (172), Expect = 5e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| ||||| |||||||| ||||| Sbjct 6052 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 6111 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||||| || || |||||||||||||| || ||||| ||||| Sbjct 6112 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 6171 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||||||||| |||||||| | ||| || || ||| ||||| || Sbjct 6172 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGC-GACTACAA 6230 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || ||||| ||| || || || || Sbjct 6231 CATTCAGAAGGAGAGCACCCTGCACCTTGT 6260 >seq388 Length=4052 Score = 152 bits (168), Expect = 6e-32 Identities = 294/430 (68%), Gaps = 8/430 (2%) Strand=Plus/Minus Query 31977 CGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAA 32036 ||||| |||||||||||||| ||||||||||| | | || ||| ||||| || Sbjct 1813 CGTGGTCGACGGCCTCAAGCCGGGCCAGCGCAAGGTCCTGTTCGGTTGCTTCAAGCGTAA 1754 Query 32037 CCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTA 32096 ||| || || || |||||| ||||||| ||| |||||| | ||||| ||||| || Sbjct 1753 CCTCAAGACGGAAATCAAGGTGCAGCAGCTGCAGGGTTACGTGTCGGAGCACACGGCGTA 1694 Query 32097 TCACCACGGCGA--GGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTC 32154 |||||||||||| | ||| | | || ||||| |||||| ||| ||||| | Sbjct 1693 TCACCACGGCGACCAGAGTCTGGTAATG--ACGATTGTGGGCCTTGCGCAGGACTTTTGC 1636 Query 32155 GGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGT 32214 || || ||| |||| | ||| ||| || || || || || || | || Sbjct 1635 GGCAGCAACAACGTGAATATGCTCATGCCCAACGGCCAATTCGGCACGCGCAGCATGGGC 1576 Query 32215 GGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC--CCGTCTCGCACCTTCGACGCGCA 32272 |||||||| || |||||| |||||||||| ||||| |||| ||| | | |||||| Sbjct 1575 GGCAAGGACGCGGCGAGCGCCCGTTACATTTTCACGGCCGTGCCGCGCAT--CACGCGCC 1518 Query 32273 AGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGG 32332 || | ||| ||||| |||||| || | ||||| ||| || ||||| ||| | Sbjct 1517 AGCTCTTCCACCCGAAGGACGACGCACTCCTCAACTACCTCGACGAGGACGGGCAGAGCA 1458 Query 32333 TCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCA 32392 ||||||| | || ||| ||||| | ||| | | || | ||||| || || || | Sbjct 1457 TCGAGCCCGAGTGGTACGTCCCGGTCGTGCCGCAGGTGCTGCTCAACGGCGCCGACGGTA 1398 Query 32393 TCGGAACGGG 32402 |||| ||||| Sbjct 1397 TCGGCACGGG 1388 Score = 138 bits (152), Expect = 1e-27 Identities = 234/335 (70%), Gaps = 12/335 (4%) Strand=Plus/Minus Query 31210 AAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCA----CGAGTGCACGCTTAT 31265 |||||||| || |||||||||||||| || ||| |||| |||||||||||| || Sbjct 2604 AAGCTCGAGGATGCCAACTGGGCCGGCACG---AAG-CGCAGCGCCGAGTGCACGCTGAT 2549 Query 31266 TATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGCG 31325 | |||||||| |||||||| |||||||| || | | ||| | || | || || || Sbjct 2548 CCTCACCGAGGGCGACTCGGCCAAGGCGCTCGCCGTGTCGGGCATCAGCGAGGTCGGCCG 2489 Query 31326 CAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGT 31385 | | |||| ||| ||||| ||||| || ||||||| || ||||| || || || || Sbjct 2488 CGACGCGTACGGCGTGTTCCCGCTGCGCGGCAAGCTGCTCAACGTGCGGGAGGCATCGCA 2429 Query 31386 TAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCA 31445 | ||| | | | | || | ||| | || | || |||||||||| || ||||| Sbjct 2428 CGACCAGATCATGAAGAACGCCGAGATCAAGCACATCAAGGAGATCCTCGGCCTGCAGCA 2369 Query 31446 TGGCAAGGTATATAATTCACTGAG--AGAATTGCGGTACGGTCGCCTCATGATTATGACC 31503 |||||||| || | || || | | |||||||||| | || ||||| |||||| Sbjct 2368 CGGCAAGGTCTACGA--CAGTGTGGATGGCCTGCGGTACGGCAGTCTGATGATCATGACC 2311 Query 31504 GACGCAGATCTCGACGGCAGTCACATCAAGGGTCT 31538 ||| || | || ||| ||||||||||| || Sbjct 2310 GACCAGGACTTTGATGGCTCGCACATCAAGGGCCT 2276 >seq342 Length=6017 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||| | || |||||||| |||||||| ||||| || || || ||||| ||||| Sbjct 3373 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 3432 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || || |||||||||||||| || ||||| ||||| Sbjct 3433 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 3492 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || ||||| || ||||||| ||| || || ||| ||||| || Sbjct 3493 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGC-GACTACAA 3551 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||| || || || || |||| || || ||||| Sbjct 3552 CATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 3599 >seq353 Length=5542 Score = 129 bits (142), Expect = 7e-25 Identities = 118/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||| | || || |||||||||||||| ||||| || ||||||||||| || || ||||| Sbjct 650 AAGACGAAGATCCAGGACAAGGAGGGCATTCCGCCGGACCAGCAGCGCCTGATCTTTGCG 709 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || |||||||| ||||||| |||||||| ||||| ||| |||| ||||| ||| Sbjct 710 GGCAAGCAACTGGAGGATGGACGTACCCTGAGTGACTACAATATCCAGAAGGAGAGCACG 769 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || ||| ||||||| |||||||| Sbjct 770 CTGCACCTTGTCCTGCGTCTGCGCGGTGG 798 >seq788 Length=40807 Score = 123 bits (136), Expect = 3e-23 Identities = 222/324 (69%), Gaps = 3/324 (1%) Strand=Plus/Plus Query 64570 GAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACTG 64629 |||||||| |||||| | || |||| || | || || || | || || || Sbjct 2267 GAGACGTACTCGCTCCTCATCGACACGTACATCCGCGAGCCGGAGCAGCGTGAGTTTCTC 2326 Query 64630 TTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGG 64689 |||| ||||| ||||| | |||| || | | ||||| || |||||| | || ||| Sbjct 2327 TTCAACGCTATCGAGACGATCCCCGTCGTCAAGCAGAAGGCCGAGTGGGCCCTGCGCTGG 2386 Query 64690 AT---GAATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGA 64746 || | | | | | ||||| |||| || | || |||||| || || || Sbjct 2387 ATCTCGGACAGGCGCGCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGC 2446 Query 64747 ATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCA 64806 || || || || || || || || || |||||||| || ||||| ||||| ||||| Sbjct 2447 ATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCT 2506 Query 64807 GGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCG 64866 ||||||||||| ||||||||||| ||||| || || ||||| || ||| || ||||| Sbjct 2507 GGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCC 2566 Query 64867 GTTACCCTGTTCAGCCACCTCAAG 64890 | ||||||||||||||| ||| Sbjct 2567 TGTCTCCTGTTCAGCCACCTGAAG 2590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570303057253600