Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08-
11] 1,030 sequences; 7,526,115 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq266 224 1e-53
seq644 156 5e-33
seq388 152 6e-32
seq342 147 2e-30
seq353 129 7e-25
seq788 123 3e-23
>seq266
Length=19737
Score = 224 bits (248), Expect = 1e-53
Identities = 929/1440 (65%), Gaps = 74/1440 (5%)
Strand=Plus/Plus
Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415
||||| || || || || |||| || | ||| | ||||| |||||||| ||||
Sbjct 12651 AACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCG 12710
Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475
||| || ||||||||| |||| ||||||||||| || | | || ||| || ||
Sbjct 12711 TTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATCAGCAGCGAGTTG 12770
Query 80476 CGCAGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTGA---CCAAAAATCAACCCCA 80529
||||| ||||||| || | ||| | || | | | ||| | || | |
Sbjct 12771 CGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCACAGGTC--CGACG 12828
Query 80530 ACGCTGTGACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAAC 80589
|| || | ||||||||||| ||||| || ||||| ||| || || ||| || ||
Sbjct 12829 GCG-TGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAGGGCTGCCCTCGTAC 12887
Query 80590 GTCTCGTACGGGCC--CTCCGTCTTGGCCAGCTCACA----CGACTCCATAAGGGCCGCG 80643
|||||||| | ||| | || | |||||||| || || |||| | ||||||
Sbjct 12888 GTCTCGTATGTGCCATATTCGGC--CGCCAGCTCGCAGCTGCG-CTCC---AAGGCCGCA 12941
Query 80644 TGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGAC 80703
|| |||||| |||||||| | |||| |||||||| || ||||||||
Sbjct 12942 TGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCTGTCGAACGGA 13001
Query 80704 AAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGG 80763
||||||| ||||||||| | || || |||||||| || ||||| |||| ||||||||
Sbjct 13002 TAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGGGCGGTGC 13061
Query 80764 CGCTTGTTCGATCGCTCGGC---CTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGG 80820
||| ||||||| || || |||| | ||||| |||| ||||||||| ||||
Sbjct 13062 CGCATGTTCGAGCGACGTGCACTCTCC---ACAGGGTAGTAGTTGATATCGATGATGCGG 13118
Query 80821 TTCAGGTTGCGTGTA-ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTT 80879
|||||||| | || | || || | || || || || || |||| | || ||
Sbjct 13119 TTCAGGTT-CTTGCACACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTATGTCTT 13177
Query 80880 C------------CCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGC 80927
| |||| | ||| | ||| || | |||||||| |||||||| ||
Sbjct 13178 CGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGTTGCACACAGC 13237
Query 80928 CACCTCTTCAG--CATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATT 80985
||| || | | |||| |||||| || |||||||| | || || ||| ||
Sbjct 13238 TGTCTCGTCCGGCGAGCTGT--ACTCGATAATCTCCGTGCAGAGGTTCGAGCTCTTGATC 13295
Query 80986 GTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT--AGCACATGTACG 81043
|| |||||||| |||||||| |||| ||| | |||||||| || ||| | |
Sbjct 13296 GTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACA--AAAG 13353
Query 81044 GGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGAC-- 81101
| | || ||||| | || | || |||||| |||| ||| | || ||||||||||
Sbjct 13354 GATTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTGACAG 13413
Query 81102 --CACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCA 81159
| | | ||| ||| ||| | | ||||| |||| | || |||| |
Sbjct 13414 AGCGCTTGGCG----CGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCTCG 13469
Query 81160 CCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTC 81218
|| | | || |||| || ||||||||||| ||||||||||| ||||||| ||
Sbjct 13470 CCATAGCAG-TCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTT 13528
Query 81219 GTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCA 81278
| || ||| |||||| || || ||||| || || ||||||||||||
Sbjct 13529 CTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGC 13588
Query 81279 GCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATG 81338
|||| | ||||| | || ||||| ||||| || | ||| || | | ||||| ||
Sbjct 13589 GCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTG 13648
Query 81339 CCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTA 81395
||| |||||||| || | || | | ||| ||| ||| ||||||| |||||
Sbjct 13649 CCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTA 13708
Query 81396 ACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCAT--CTGACTGACCGTTC 81453
|| || || ||| | || || | ||| || | ||||| | || || |||||||
Sbjct 13709 GCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCAC--ACCGTTC 13766
Query 81454 GTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCT 81513
|| || |||| ||| ||| | || || | ||| ||| ||||| || || ||
Sbjct 13767 GTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCG 13826
Query 81514 GACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCT 81573
| | ||| ||| ||||| || | || || || || |||||||| ||
Sbjct 13827 GCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCGAGTCG 13886
Query 81574 TTTTTCAT-GTCAAGCAA-GAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGA 81631
| ||||| ||| ||| ||| || ||||| || ||| | | |||||||||||
Sbjct 13887 TCCTTCATACTCA--CAAGGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGCATTGA 13944
Query 81632 ACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTT--GACATCAGGTCATAGGTTTCCTT 81689
|||| || || | |||||| || || | | | ||||| || || || || |
Sbjct 13945 ACAGGGTCGGCGACGCGTG--TGTAAAGGCCTTCTCGGACATGTAGTTGTACGTCTCGAT 14002
Query 81690 GACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749
||| | | || || ||||| || |||| || || ||||| | ||||| ||||||
Sbjct 14003 CGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGGGG 14062
>seq644
Length=45588
Score = 156 bits (172), Expect = 5e-33
Identities = 162/210 (77%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || || |||||||| ||||| |||||||| |||||
Sbjct 6052 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 6111
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| | ||||| || || |||||||||||||| || ||||| |||||
Sbjct 6112 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 6171
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|||||||| || || ||||||||||| |||||||| | ||| || || ||| ||||| ||
Sbjct 6172 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGC-GACTACAA 6230
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614
| || ||||| ||| || || || ||
Sbjct 6231 CATTCAGAAGGAGAGCACCCTGCACCTTGT 6260
>seq388
Length=4052
Score = 152 bits (168), Expect = 6e-32
Identities = 294/430 (68%), Gaps = 8/430 (2%)
Strand=Plus/Minus
Query 31977 CGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAA 32036
||||| |||||||||||||| ||||||||||| | | || ||| ||||| ||
Sbjct 1813 CGTGGTCGACGGCCTCAAGCCGGGCCAGCGCAAGGTCCTGTTCGGTTGCTTCAAGCGTAA 1754
Query 32037 CCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTA 32096
||| || || || |||||| ||||||| ||| |||||| | ||||| ||||| ||
Sbjct 1753 CCTCAAGACGGAAATCAAGGTGCAGCAGCTGCAGGGTTACGTGTCGGAGCACACGGCGTA 1694
Query 32097 TCACCACGGCGA--GGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTC 32154
|||||||||||| | ||| | | || ||||| |||||| ||| ||||| |
Sbjct 1693 TCACCACGGCGACCAGAGTCTGGTAATG--ACGATTGTGGGCCTTGCGCAGGACTTTTGC 1636
Query 32155 GGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGT 32214
|| || ||| |||| | ||| ||| || || || || || || | ||
Sbjct 1635 GGCAGCAACAACGTGAATATGCTCATGCCCAACGGCCAATTCGGCACGCGCAGCATGGGC 1576
Query 32215 GGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC--CCGTCTCGCACCTTCGACGCGCA 32272
|||||||| || |||||| |||||||||| ||||| |||| ||| | | ||||||
Sbjct 1575 GGCAAGGACGCGGCGAGCGCCCGTTACATTTTCACGGCCGTGCCGCGCAT--CACGCGCC 1518
Query 32273 AGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGG 32332
|| | ||| ||||| |||||| || | ||||| ||| || ||||| ||| |
Sbjct 1517 AGCTCTTCCACCCGAAGGACGACGCACTCCTCAACTACCTCGACGAGGACGGGCAGAGCA 1458
Query 32333 TCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCA 32392
||||||| | || ||| ||||| | ||| | | || | ||||| || || || |
Sbjct 1457 TCGAGCCCGAGTGGTACGTCCCGGTCGTGCCGCAGGTGCTGCTCAACGGCGCCGACGGTA 1398
Query 32393 TCGGAACGGG 32402
|||| |||||
Sbjct 1397 TCGGCACGGG 1388
Score = 138 bits (152), Expect = 1e-27
Identities = 234/335 (70%), Gaps = 12/335 (4%)
Strand=Plus/Minus
Query 31210 AAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCA----CGAGTGCACGCTTAT 31265
|||||||| || |||||||||||||| || ||| |||| |||||||||||| ||
Sbjct 2604 AAGCTCGAGGATGCCAACTGGGCCGGCACG---AAG-CGCAGCGCCGAGTGCACGCTGAT 2549
Query 31266 TATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGCG 31325
| |||||||| |||||||| |||||||| || | | ||| | || | || || ||
Sbjct 2548 CCTCACCGAGGGCGACTCGGCCAAGGCGCTCGCCGTGTCGGGCATCAGCGAGGTCGGCCG 2489
Query 31326 CAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGT 31385
| | |||| ||| ||||| ||||| || ||||||| || ||||| || || || ||
Sbjct 2488 CGACGCGTACGGCGTGTTCCCGCTGCGCGGCAAGCTGCTCAACGTGCGGGAGGCATCGCA 2429
Query 31386 TAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCA 31445
| ||| | | | | || | ||| | || | || |||||||||| || |||||
Sbjct 2428 CGACCAGATCATGAAGAACGCCGAGATCAAGCACATCAAGGAGATCCTCGGCCTGCAGCA 2369
Query 31446 TGGCAAGGTATATAATTCACTGAG--AGAATTGCGGTACGGTCGCCTCATGATTATGACC 31503
|||||||| || | || || | | |||||||||| | || ||||| ||||||
Sbjct 2368 CGGCAAGGTCTACGA--CAGTGTGGATGGCCTGCGGTACGGCAGTCTGATGATCATGACC 2311
Query 31504 GACGCAGATCTCGACGGCAGTCACATCAAGGGTCT 31538
||| || | || ||| ||||||||||| ||
Sbjct 2310 GACCAGGACTTTGATGGCTCGCACATCAAGGGCCT 2276
>seq342
Length=6017
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||| | || |||||||| |||||||| ||||| || || || ||||| |||||
Sbjct 3373 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 3432
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||||| || || |||||||||||||| || ||||| |||||
Sbjct 3433 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 3492
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || || || || || ||||| || ||||||| ||| || || ||| ||||| ||
Sbjct 3493 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGC-GACTACAA 3551
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||| || || || || |||| || || |||||
Sbjct 3552 CATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 3599
>seq353
Length=5542
Score = 129 bits (142), Expect = 7e-25
Identities = 118/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543
||| | || || |||||||||||||| ||||| || ||||||||||| || || |||||
Sbjct 650 AAGACGAAGATCCAGGACAAGGAGGGCATTCCGCCGGACCAGCAGCGCCTGATCTTTGCG 709
Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603
|| |||||||| ||||||| |||||||| ||||| ||| |||| ||||| |||
Sbjct 710 GGCAAGCAACTGGAGGATGGACGTACCCTGAGTGACTACAATATCCAGAAGGAGAGCACG 769
Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || || ||| ||||||| ||||||||
Sbjct 770 CTGCACCTTGTCCTGCGTCTGCGCGGTGG 798
>seq788
Length=40807
Score = 123 bits (136), Expect = 3e-23
Identities = 222/324 (69%), Gaps = 3/324 (1%)
Strand=Plus/Plus
Query 64570 GAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACTG 64629
|||||||| |||||| | || |||| || | || || || | || || ||
Sbjct 2267 GAGACGTACTCGCTCCTCATCGACACGTACATCCGCGAGCCGGAGCAGCGTGAGTTTCTC 2326
Query 64630 TTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGG 64689
|||| ||||| ||||| | |||| || | | ||||| || |||||| | || |||
Sbjct 2327 TTCAACGCTATCGAGACGATCCCCGTCGTCAAGCAGAAGGCCGAGTGGGCCCTGCGCTGG 2386
Query 64690 AT---GAATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGA 64746
|| | | | | | ||||| |||| || | || |||||| || || ||
Sbjct 2387 ATCTCGGACAGGCGCGCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGC 2446
Query 64747 ATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCA 64806
|| || || || || || || || || |||||||| || ||||| ||||| |||||
Sbjct 2447 ATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCT 2506
Query 64807 GGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCG 64866
||||||||||| ||||||||||| ||||| || || ||||| || ||| || |||||
Sbjct 2507 GGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCC 2566
Query 64867 GTTACCCTGTTCAGCCACCTCAAG 64890
| ||||||||||||||| |||
Sbjct 2567 TGTCTCCTGTTCAGCCACCTGAAG 2590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570303057253600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |