Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1023 107 2e-18 seq386 84.2 2e-11 >seq1023 Length=24217 Score = 107 bits (118), Expect = 2e-18 Identities = 254/379 (67%), Gaps = 6/379 (2%) Strand=Plus/Minus Query 30083 TGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATG 30142 || || || ||||| |||||| | ||| || |||||||||| |||| || | ||| Sbjct 15679 TGACAAGGTGGAAGCGCCATGTTGTCCAGATCGATGGGGTTCCATGCGCTCAGTAAAATG 15620 Query 30143 CGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCC 30202 |||| ||| |||||| || |||| | || | | ||| || ||||| || ||| Sbjct 15619 CGCCGGTCCGTTGGGTTCGTCTTGATTTGTTCGATGACGTGGGCGAGTTGATCGACACCC 15560 Query 30203 ATCCCCGAGTAGTCTGCCCTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAA 30261 ||| ||||| || ||| ||| |||| || || || || | ||| ||||| Sbjct 15559 TGACCCTGGTAGT-TGGTATCAGCATCCACATACTTCGCGCCAAAGTGGCGCCATTGGAA 15501 Query 30262 CCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAA 30321 |||||||| || |||||||| || || | |||| | | || | ||| | || ||| Sbjct 15500 GCCGTACACTGGACCCAGGTCACCTTCACGGCGGTGCCCAAGTCCGCGCTTCTGCAGAAA 15441 Query 30322 GTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTC--TCAGAGAGCTCTTTGGAG 30379 || ||||||| ||| | |||||||| | ||| ||| ||| |||| || ||| Sbjct 15440 TTCGGTGGAACCATTGCCATCCCAGATGTGTACAT--TTCGTTCACTGAGCCACTTAGAG 15383 Query 30380 TTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTC 30439 | ||| ||| | ||||||||||||||| |||| ||| | ||||||| | | Sbjct 15382 TCCGTGCGCCCGGCAATGAACCACAGCAGCTCTTCCAGCACGCCACGGTAAAAGACACGC 15323 Query 30440 TTGGTCGTGAGGAGGGGAA 30458 || || || | ||||||| Sbjct 15322 TTCGTTGTCAAAAGGGGAA 15304 >seq386 Length=4060 Score = 84.2 bits (92), Expect = 2e-11 Identities = 167/242 (69%), Gaps = 18/242 (7%) Strand=Plus/Minus Query 52677 GAGGGCTACCTGGACAGGGTGACTGTG---GACGTGGACTCTGACGGCAAGAAGCTCGTC 52733 ||||||||| ||||| |||| | | ||| |||||| ||| ||| ||||||| Sbjct 942 GAGGGCTACGTGGACCAGGTGCTTATCAGCGACACGGACTCGGACC---AGACGCTCGTC 886 Query 52734 AAGGTGAGGCTGAGGGCCCCCAGGCAC-----CCAGAGATGGGCGACAAGTTTGCGTCG- 52787 |||| | || | || |||| | | |||||| ||||||||||||| ||||| Sbjct 885 AAGGCG---CTCAT--CCGCCAGACGCGGCGGCCAGAGCTGGGCGACAAGTTCTCGTCGC 831 Query 52788 TTCACGGCGCAAAAGGGGACGTGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTTCGAC 52847 |||||| |||||||| ||| || | || | ||||||||| |||| ||| | Sbjct 830 GCCACGGC-CAAAAGGGCGTGTGTGGTCTGATTGTGCCGCAGGAGGACCTGCCGTTCACC 772 Query 52848 AAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGACC 52907 | ||||| | |||||| ||||||| |||||||||| ||| || || | ||||| Sbjct 771 GACGACGGTATCCACCCCGACATCATCATGAACCCCCACGGCTTCCCGTCGCGTATGACG 712 Query 52908 GT 52909 || Sbjct 711 GT 710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406305299534760