Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264705.1_202015-08- 11] 1,030 sequences; 7,526,115 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq644 154 1e-32 seq342 150 2e-31 seq353 123 2e-23 seq286 91.5 1e-13 >seq644 Length=45588 Score = 154 bits (170), Expect = 1e-32 Identities = 163/213 (77%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || ||||| |||||||||||||||||||| |||||| || ||||| |||| || Sbjct 6261 CACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTC 6202 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| || ||||| ||||| ||||||||||||| || | || |||||||||| Sbjct 6201 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTG 6142 Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||| || | || | ||||| |||||| ||||| | || ||||| Sbjct 6141 GATCTTGGCCTTGACATTGTCG--ATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 6084 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| ||||| || |||||| Sbjct 6083 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 6051 >seq342 Length=6017 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || ||||||||||||||||| ||||| |||||| Sbjct 3599 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3540 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||||||||| ||||||||||||||||||| || Sbjct 3539 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 3480 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||||| | | |||||| ||||||||| Sbjct 3479 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 3420 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 || | || ||||| || || || || ||||| ||||| | |||||| || Sbjct 3419 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGTA 3369 >seq353 Length=5542 Score = 123 bits (136), Expect = 2e-23 Identities = 181/255 (71%), Gaps = 27/255 (11%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || |||||||||||||||||||| || || ||||| Sbjct 798 CCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTC 739 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || || |||||||| || || ||||||||||| ||||||| ||| Sbjct 738 AGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 679 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-------CTTCAACGACG------ACACAG 41798 | || |||||||||| ||| || ||| | | | || || |||| Sbjct 678 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTCGTATCACACACCA 619 Query 41799 TG-TCGCTCGACTC--------CAC-CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848 || ||| |||| || ||| ||||| ||| || ||||| || || || |||||| Sbjct 618 TGCTCGATCGAGTCGCTGCTCTCACACTCCAGCGTAATTGTTTTCCCTGTAAGTGTCTTT 559 Query 41849 ACGAAAATCTGCATG 41863 ||||||||||||||| Sbjct 558 ACGAAAATCTGCATG 544 >seq286 Length=15064 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| || |||||||||||||||||||||||||||||| Sbjct 14972 GCCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCT 15031 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGC 41727 || ||||| | || || |||||||||||||| Sbjct 15032 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGC 15064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298047836000