Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264715.1_202015-08-
11] 769 sequences; 7,562,283 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq609 140 3e-28
seq686 105 6e-18
seq206 104 2e-17
seq768 86.0 5e-12
>seq609
Length=45697
Score = 140 bits (154), Expect = 3e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || ||||||||||| ||||||| ||||| ||||||||||| || |||||| |
Sbjct 39432 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 39491
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
||| |||||||| || || ||||| |||||||||||||| || || || || |
Sbjct 39492 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 39551
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| ||||||| ||||||||| | ||| | ||| ||||| |||||||| || ||
Sbjct 39552 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 39611
Query 118727 AAAAATCTGCATGGC 118741
|| || ||||||||
Sbjct 39612 GAAGATTTGCATGGC 39626
>seq686
Length=40870
Score = 105 bits (116), Expect = 6e-18
Identities = 245/360 (68%), Gaps = 11/360 (3%)
Strand=Plus/Plus
Query 44942 ATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAAC 45001
||||| || ||| |||| ||||| | || ||| | || || || ||||||||| ||
Sbjct 2518 ATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGAC 2577
Query 45002 TTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGTTGG-ACGCGCCCACCGTCAA 45060
|||||||| ||| || | | | | || || || | || | ||| || ||
Sbjct 2578 TTTGCCTGTCTC--CTGT--TCAGCCACCTGAAGAAGCGTGCGCACCCTGACACAGTGAA 2633
Query 45061 CGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGA 45120
| ||| || |||| || |||||||| ||| ||| ||||| |||| || |||| |
Sbjct 2634 CCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGT 2693
Query 45121 ATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCG 45180
||| || | || ||||||||| | ||| | |||||||||||||||| || || ||
Sbjct 2694 TTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCG 2753
Query 45181 TCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTA-TACT-GA-GAACCCATTCGAGTT 45237
|| |||||| | | | | ||| || | |||| ||| || |||||| ||||| ||
Sbjct 2754 CCTGCTCGTCAACCT-CGGCAACCC--GAAGCACTACAACTCGACGAACCCCTTCGACTT 2810
Query 45238 TATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATA 45297
|||| | || || ||| | ||||||| | || ||||| ||| ||||| | ||| ||
Sbjct 2811 TATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 2870
>seq206
Length=8409
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||||| || ||| || || |||||||| ||||||| ||||| |||
Sbjct 2441 CAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATC 2500
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || || ||| |||| || ||||| || || ||||| || |||||||||||
Sbjct 2501 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 2560
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| ||||| | ||| ||||||| ||| | |||
Sbjct 2561 CTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGT 2620
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|| ||||| || || || || || | |||||||
Sbjct 2621 CTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 2655
>seq768
Length=19855
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 134412 AGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACAC 134471
|| || | ||| || || |||| ||||||||| || || ||||| ||||| ||
Sbjct 13862 AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 13921
Query 134472 ATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGC 134529
||||| | |||| || || ||||| ||||| |||||| ||||||| | |
Sbjct 13922 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 13981
Query 134530 CCAGACTCATCAACTGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCA 134589
| ||| || | | || || || || ||||| ||||| |||||||| ||| | |
Sbjct 13982 TCGGAC--ATGTAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 14039
Query 134590 GAGCGACGCGCATGAGCATGTGTTGGGGTCTCTCC 134624
|||||||||||||||||||| ||||| | ||||
Sbjct 14040 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCC 14074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433826334060148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |