Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264715.1_202015-08-
11] 769 sequences; 7,562,283 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq609 118 1e-21
seq206 95.1 1e-14
seq236 86.0 7e-12
>seq609
Length=45697
Score = 118 bits (130), Expect = 1e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040
|||| ||||||||||| ||||| ||||| || ||| || || |||| || ||||||
Sbjct 39421 TGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGC 39480
Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100
||||||||||| || || ||||| ||||| | || | || |||||||||| ||| ||
Sbjct 39481 TTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTG 39540
Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160
|||| | | | |||||| ||| || || || | || || || ||||| ||
Sbjct 39541 GCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTC 39600
Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183
|| ||||| || |||||||||||
Sbjct 39601 AGAGTCTTGACGAAGATTTGCAT 39623
>seq206
Length=8409
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| ||| | || | ||||||||||| || || ||||| || ||| || || |
Sbjct 2439 CGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCA 2498
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || |||||||| || ||||| || || ||||| ||||| | || | | |||||||
Sbjct 2499 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTG 2558
Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148
||| ||| || || | || | | ||||||| || ||||| |||| |||||
Sbjct 2559 TCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATC 2618
Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || || || ||||| || || | ||||||
Sbjct 2619 GTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 2653
>seq236
Length=5533
Score = 86.0 bits (94), Expect = 7e-12
Identities = 98/132 (74%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027
||||| || | |||| ||||||||||| || |||||||| ||| ||| || || |
Sbjct 786 ACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCC 727
Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087
|| || || ||||| || || || || || ||||||||||| | ||| | || ||||||
Sbjct 726 ATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTT 667
Query 43088 GTCCATGATTTT 43099
|||| ||| ||
Sbjct 666 GTCCTGGATCTT 655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571812103403320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |