Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264715.1_202015-08- 11] 769 sequences; 7,562,283 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq768 109 7e-19 >seq768 Length=19855 Score = 109 bits (120), Expect = 7e-19 Identities = 418/654 (64%), Gaps = 2/654 (0%) Strand=Plus/Plus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||||| |||||| || |||| | | || || ||| || ||||| |||||| Sbjct 13508 GGGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATC 13567 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || || || | || || || | | | |||||| || || ||||| ||| Sbjct 13568 CACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGA 13627 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 || | || | | || || || |||||||| |||| ||| || || | | || || Sbjct 13628 TCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGG 13687 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 13688 CGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGC 13747 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533 | ||||||||| | ||| || || |||| ||| || || | |||||||| || Sbjct 13748 ACAATACCGTTGCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTG 13807 Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63593 || ||||| || || || ||| | || ||| | || || || | |||| Sbjct 13808 TGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTG 13867 Query 63594 TCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63653 || || || || || || || || |||| | | || || || ||||||||| Sbjct 13868 TCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGG 13927 Query 63654 TGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63713 | | || || ||||| || | ||| || || ||||| ||||| || || || Sbjct 13928 GGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGAC 13987 Query 63714 A-GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 63772 | |||| ||||||||||| || || | | ||| || || || || ||||| Sbjct 13988 ATGTAG-TTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGAC 14046 Query 63773 ACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGA 63832 ||||| | ||||||||| || | || ||| ||| || || || || |||||| Sbjct 14047 GCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGATCCGCAGCAGGTAGGA 14106 Query 63833 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63886 || | || || || ||||| ||||||| ||||| || |||||||| Sbjct 14107 GCGCTCGAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAAT 14160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629811545878320