Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264715.1_202015-08- 11] 769 sequences; 7,562,283 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq768 273 6e-68 >seq768 Length=19855 Score = 273 bits (302), Expect = 6e-68 Identities = 630/936 (67%), Gaps = 36/936 (4%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 |||||| | ||| |||||||| || |||||||| | ||| || ||||| ||| Sbjct 14121 AAGACGCTCGAGCGCTCCTACCTGCTGCGGATCAATGGCAAGGTTGCGGAGCGCCCCCAG 14062 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | ||||| || || | || ||||| || ||| || | |||||| || Sbjct 14061 CACATGCTCATGCGCGTCGCCGTCGGCATCCACGGCGAGGACGTGGCGAGCGCGATCGAG 14002 Query 363520 ACATATAAGCTTCTAAGTGCTCGTGTA----TTCACGCACGCCACGCCAACAATGTACAA 363575 || || || ||| || || | | || || ||||| |||| || ||| ||| Sbjct 14001 ACGTACAA----CTACATGTCCGAGAAGGCCTTTACACACGCGTCGCCGACCCTGTTCAA 13946 Query 363576 TGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTC 363635 ||| || || | || || || ||||| || ||||| ||| | | ||||||||||| || Sbjct 13945 TGCCGGCACGCCCAACCCCCAAATGTCGTCGTGCTTCCTTGTGAGTATGAAGGACGACTC 13886 Query 363636 CATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGG 363695 ||||||||||| | ||||| || |||| ||||| | || ||||| || ||||| Sbjct 13885 GATCGAGGGTATATACGACACGCTCAAGACCTGTGCGATGATCAGCAAGACGGCCGGCGG 13826 Query 363696 AATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCAC-AGGGG 363754 |||||| | |||||||| ||||||| | | ||||| |||||| | || Sbjct 13825 TATTGGTCTGAACATCCACAACATTCGTGCGACGGGCTCGTACATCGCCGGCACGAACGG 13766 Query 363755 GATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCG 363814 | | || || | || |||||||| || |||| |||| || ||| | ||||| | Sbjct 13765 TGTGAGC-AACGGTATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGG 13707 Query 363815 ACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCG 363874 ||||||| || |||||| || || ||||| || || || ||||| || | | Sbjct 13706 ACCAGGGCGGCAACAAGCGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGG 13647 Query 363875 ATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTG 363934 | ||||||| ||| |||| || || || ||| || || |||||| |||| || || | Sbjct 13646 ACGTTTTTGAATTTATTGATCTGCGCAAGAACCATGGCAAGGAGGAAGTGCGCGCGCGCG 13587 Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAG- 363993 | |||||| || || ||| || | || | || ||| || || || ||| | Sbjct 13586 ACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGCGCCGTGTCGA-ACAGAACGGC 13528 Query 363994 AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACG 364051 | ||||| || | ||||| ||| || |||||||| | || || ||| || || | Sbjct 13527 GACTGGTCGCTGATGTGCCCCGCCGAGTGCCCAGGTCTGGCTGACTGCTAT--GGCGAGG 13470 Query 364052 ACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG-------AAAGGCTCGTAAGACA 364104 | | || |||||| ||||| ||||| || ||||| || |||| | || Sbjct 13469 AGTTTGATGCTCTGTACGAGAAGTACGAGCGCGAGGGCCGCGCCAAGCGCTC---TGTCA 13413 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 | || |||||||| |||| || ||| | || |||| |||||||| || | || Sbjct 13412 A----GGCGCAGAAGCTGTGGTACGCTATCCTCGAGGCGCAAATTGAGACGGGCAATCCT 13357 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | | | ||||||| || ||| ||||||||| |||||| || |||| || || | | Sbjct 13356 TTTGTCCTGTACAAGGACTCGGCGAACCGCAAGAGTAACCAGAAGAACCTGGGCACGA-T 13298 Query 364225 CAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || ||||| ||||| || || |||||||| || |||| | | || |||||||| || Sbjct 13297 CA--AGAGCTCGAACCTGTGCACGGAGATTATCGAGTACAGCTCGCCGGACGAGACAGCT 13240 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317 || || ||||| |||||||| ||||| ||| ||||| Sbjct 13239 GTGTGCAACCTGGCGTCGATTGCGCTGCCGACGTTT 13204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303340758301358