Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264715.1_202015-08- 11] 769 sequences; 7,562,283 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq768 241 2e-58 >seq768 Length=19855 Score = 241 bits (266), Expect = 2e-58 Identities = 1039/1623 (64%), Gaps = 41/1623 (3%) Strand=Plus/Plus Query 115681 CCCCGATCCGCCGCCATATC---AATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 115737 || || || || |||||||| |||||| |||| |||| ||||||||||| || Sbjct 12461 CCACGGTCTGCGGCCATATCGAGAATCAC---CTTCTGGCTGATCTCCCACACAGTCTTG 12517 Query 115738 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTG 115797 |||||| ||| || | || ||||| | |||| || ||||| ||||| || | Sbjct 12518 TAGAGGGCCTTGATGTGGTCAGGGATGCCAGCGATGTTCTGGATTGAGCCGCCATGCGCA 12577 Query 115798 ACCATGAGATCCTTCAT--ATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGA 115855 | || | |||||| | | || |||||| || | || || || || | Sbjct 12578 ATAATCTTCTGCTTCATCGAGTCATT--CCAGAGGCCCAGCTCGACAAGCTCGCGCAGCA 12635 Query 115856 GGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCG 115915 | | ||||| || |||||||| || || || | || || |||||| ||| Sbjct 12636 GCCACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCG 12695 Query 115916 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 115975 |||| |||||||||||||| ||| || | ||| || |||||||| || ||||||| Sbjct 12696 TGTACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGG 12755 Query 115976 GTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCC 116035 | ||||| || || |||||| ||||| | ||| | ||||||| | | ||| Sbjct 12756 GCGCCATCAGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCC 12815 Query 116036 AGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACG 116095 |||| | | | | | | | |||||| || |||| |||| || || || | Sbjct 12816 AGTCCCACAGGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGG 12875 Query 116096 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 116155 | || ||||| | ||||| |||| ||| | | |||||| ||| |||| || Sbjct 12876 CAGGGCTGCCCTCGTACGTCTCGTATGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCT 12935 Query 116156 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 116215 | | ||| || || || || |||||||| || | |||||| ||||| | | Sbjct 12936 CCAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGC 12995 Query 116216 AATCAAACGCGAGACGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 116274 || |||| || | || | || || |||| || || || |||||||||| || Sbjct 12996 TGTCGAACG-GATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCG 13054 Query 116275 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCG 116334 || ||||| || | ||| || || || || ||||||| || || | || ||||| Sbjct 13055 ATGGGGCGGTGCCGCATGTTCGAGCGACGTGCACTCTCCACAGGGTAGTAGTTGATATCG 13114 Query 116335 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAAT-- 116392 || | | || || || ||| || || || | | || || || || | | | Sbjct 13115 ATGATGCGGTTCAGGTTCTTGCACACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTG 13174 Query 116393 CAAAACTGCGAGTCTC----TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 116448 | || |||| | | | | | | || | || || || || |||||||| || Sbjct 13175 TATGTCTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGTTG 13234 Query 116449 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 116508 ||||||| ||||| ||| ||||||| ||||| ||||| |||| || || ||| Sbjct 13235 CACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCACAGGTTCGAGCTC 13294 Query 116509 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATA 116568 || || ||||||| |||||| || || ||| ||| || |||||||| || | | Sbjct 13295 TTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACA 13354 Query 116569 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGG 116627 | || | |||||||| |||| | || ||| ||||| | ||| | | || ||| || | Sbjct 13355 AAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTG 13414 Query 116628 CACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTC 116687 |||| | ||||| || ||||| ||||||||| ||| || || |||||||| || Sbjct 13415 -ACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCTC 13473 Query 116688 ACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCAC 116746 ||| ||| || | || ||||| || | || || | || ||||| | || Sbjct 13474 -GCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGT 13532 Query 116747 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGAC 116806 || || || || |||||| || || || ||||| |||||| ||| || || || Sbjct 13533 TCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCG 13592 Query 116807 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 116866 ||| |||| || | || || || |||| || | ||| || | | |||| || Sbjct 13593 CGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGT 13652 Query 116867 GCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACAT 116923 ||||||| |||||||| | ||| | | ||| ||| || |||||| || | Sbjct 13653 GCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGT 13712 Query 116924 ACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC----ATCAGATTGGCCA 116979 | | |||||| ||| | ||||| ||||| || | ||||| ||| | || Sbjct 13713 AGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCACA----CCG 13768 Query 116980 TTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATAC 117037 || || || ||| |||||| | | || | | | |||||||| || |||||||| Sbjct 13769 TTCGTGCCGGCGATGTACGAGCC--CGTCGCACGAATGTTGTGGATGTTCAGACCAATAC 13826 Query 117038 CCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCG 117097 | || ||| ||| ||| || || | |||| || |||| || || ||||||| Sbjct 13827 CGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCG 13886 Query 117098 AGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGT 117157 |||| |||| | | |||||||| ||||||||| || | || || || || | Sbjct 13887 AGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGCAT 13946 Query 117158 TGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT--TGGGACATCTTATCGTAGGTCTC 117215 |||| ||||| || | |||||| || | | ||| | |||||| | | ||| ||||| Sbjct 13947 TGAACAGGGTCGGCGACGCGTG--TGTAAAGGCCTTCTCGGACATGTAGTTGTACGTCTC 14004 Query 117216 CAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTG 117275 | | | | ||| || ||||| || |||| | ||| ||||| | ||||| || Sbjct 14005 GATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTG 14064 Query 117276 GGG 117278 ||| Sbjct 14065 GGG 14067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613501302662040