Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264715.1_202015-08-
11] 769 sequences; 7,562,283 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq609 102 6e-17
seq206 84.2 2e-11
seq236 82.4 6e-11
>seq609
Length=45697
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 48551 CCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATC 48610
||| | ||| | || || |||||||| || ||||| ||||| || || | ||| |
Sbjct 39408 CCGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC 39467
Query 48611 GTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTT 48670
||| || | ||||||||| || || ||||| |||||||| |||| || | |||||||||
Sbjct 39468 GTCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTT 39527
Query 48671 GTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAAT 48730
||| ||||| || ||| | | | || |||| ||| ||||| | |||||
Sbjct 39528 GTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAAT 39587
Query 48731 CGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| || || |||| ||| || || || || |||||
Sbjct 39588 CGTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 39623
>seq206
Length=8409
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||| | || ||||||||||| || || || ||||| || || | |||
Sbjct 2436 AGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGA 2495
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||| ||||| || ||||| |||||||| |||| || | ||||||
Sbjct 2496 CCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCC 2555
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | || || | ||||||||| | ||
Sbjct 2556 TTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTG 2615
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769
||||| || || || | || || || || | ||||| ||
Sbjct 2616 ATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGT 2656
>seq236
Length=5533
Score = 82.4 bits (90), Expect = 6e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| ||||||||||| || || |||||||| ||| || | || | || |||| |||
Sbjct 773 TGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTGC 714
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| || ||||| ||||| ||||| || |||| |||| ||||||||||||
Sbjct 713 TTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTC 664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380934029781387
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |