Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264715.1_202015-08- 11] 769 sequences; 7,562,283 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq608 280 4e-70 seq188 93.3 1e-13 seq287 87.8 5e-12 >seq608 Length=156835 Score = 280 bits (310), Expect = 4e-70 Identities = 942/1446 (65%), Gaps = 33/1446 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||| | || || ||||| ||||| || || |||||||| || || ||||| || || ||| Sbjct 28194 GCTGTTGGTATTGATTTGGGTACCACCTACTCTTGTGTGGCCGTCTGGCAGAACGACCGT 28135 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || | ||||| || || || |||||| | || || || || |||||||| || ||| Sbjct 28134 GTCGAGGTCATTGCCAACGACCAGGGTAACCGTACGACTCCTTCGTACGTTGCCTTCACC 28075 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||| |||||| | || || || || | ||| || || | || Sbjct 28074 GACACGGAGCGTCTGATCGGTGATGCCGCCAAGAACCAGGTGGCTATGAACCCCCACAAC 28015 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437 || || || || || ||||| || |||||| | ||||| | |||| || || Sbjct 28014 ACTGTCTTCGACGCCAAGCGTCTGATTGGTCGCAAGTTCAAC-GACACTGAGGTTCAGTC 27956 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGG---TGATAAACCAATTAT 349494 ||| | || || | || || | || || ||| | || ||| || |||| Sbjct 27955 GGATATGAAGCACTGGCCGTTCTCGGTCATT------GACCGCTCTGGTAAGCCCGTTAT 27902 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC--GAAGAAATTTCATCAATG 349552 || ||||| || ||||| | || || || || | || ||||| || || ||| Sbjct 27901 CCGCGTCGAATACAAGGGTGAGGAGAAG--ATCTTCACTCCTGAGGAAATCTCCTCGATG 27844 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGG-TGAAACAGTAACTGATGC 349611 || | |||| ||| || | ||||| || || | || | || || | ||||| Sbjct 27843 GTCCTGCTTAAGATGCGTGAGACCGCTGAGGCTTACCTTGGCTCGGAC-GTGAAGGATGC 27785 Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671 ||| | ||||| || ||||| || || || | ||||| || || || || ||||| Sbjct 27784 TGTGGTGACTGTCCCGGCCTACTTCAACGACTCGCAGCGCCAGGCTACCAAGGACGCTGG 27725 Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731 |||||||| | ||||| | | || ||||| || || || ||||| || ||||| Sbjct 27724 TGTGATTGCGGGTCTCAATGTCATGCGTATCATTAACGAGCCTACGGCTGCTGCTATTGC 27665 Query 349732 ATATGGGCTTGATAA-AATGA-GTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || || || || || | | || |||| || || ||||| || || | ||| Sbjct 27664 CTACGGTCTCGACAAGAAGGACGAGTCCGAGAAGAATGTA--CTTATCTTCGACCTGGGT 27607 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || | || ||||| || || || ||||| || Sbjct 27606 GGTGGTACTTTCGATGTGTCGCTCCTGACGATCGAGGAGGGTATCTTCGAGGTTAAGGCT 27547 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTT 349909 || || ||||| || || |||||||| || || ||||| || ||||| || || ||| Sbjct 27546 ACCGCGGGTGACACGCACCTTGGTGGTGAGGACTTTGACAACCGTCTTGTGAACCACTTT 27487 Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATC-CTAGAGCAATGC 349967 || | || || ||||| |||| || | ||| || | || | || | || ||| Sbjct 27486 GTGCAGGAGTTCAAGCG-CAAGAACAAGAAGGAT-CTGACCACAAACGCTCGTGCTCTGC 27429 Query 349968 GTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCT 350027 |||| || | ||||| | || ||||||||||| | | || || || |||| ||| Sbjct 27428 GTCGTCTGCGCACTGCTTCGGAGCGTGCTAAGCGCACTCTCTCGTCGGCTGCCCAGACCA 27369 Query 350028 CTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTC 350087 | ||||| ||||| || || ||| || | || |||| |||||||||| ||||| | Sbjct 27368 CCATTGAGATTGACTCGCTCTTTGAGGGTATTGACTTCTACACATCTATTACTCGTGCCC 27309 Query 350088 GGTTTGAAGAATTATGTATGGATCT-TTTTAGAGCAACAATGGATCCTGTGGAAAAAGTA 350146 | || || || | || || || || | | | || || || ||||| || || || Sbjct 27308 GTTTCGAGGAGCTTTGCGGTGACCTCTTCTCGCAC-ACCATTGACCCTGTCGAGAAGGTC 27250 Query 350147 TTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCT 350206 | ||||| || || ||| | | | | || | || | |||||||| || Sbjct 27249 CTCCGTGATGCCAAGATCGACAAGGGTTCGGTCAACGAGATTGTGCTGGTTGGTGGCTCG 27190 Query 350207 ACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCT 350266 || |||||||| || || || | || || || || || ||| || || Sbjct 27189 ACTCGTATTCCTCGCGTGCAGAAGCTCCTTCGCGACTTCTTCAACGGCCGCGAGCCCAAC 27130 Query 350267 AGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTA 350326 | || || || || || || || ||||| || |||||||| || ||||| | ||| | Sbjct 27129 AAGTCTATCAACCCTGACGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATTCTG 27070 Query 350327 TCTGGAAATAAGAGTTC---TAAAATTGATGATCTATTACTACTAGATGTAACTCCACTT 350383 || || | | | ||| || | | ||||| | || || ||||| | || ||| Sbjct 27069 TCCGG---TGACACTTCGGAGAAGACGCAGGATCTGCTGCTGCTCGATGTCGCCCCTCTT 27013 Query 350384 TCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACT 350443 ||| | || | || || | |||| || | ||| ||| || | || | ||| Sbjct 27012 TCGATGGGTATCGAGACCGCCGGTGGTGTCTTCACTCCTCTGATCAAGCGCAACACGACT 26953 Query 350444 GTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACA 350503 || ||||| || ||||| | || || || | ||| || || ||||| | || Sbjct 26952 GTGCCTACGAAGAAGTCGGAGGTCTTCTCGACGTATGCCGACAACCAGCCTGGTGTGCTG 26893 Query 350504 ATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTT 350563 || || || || || ||||| ||||| ||||| || || || || || || | ||| Sbjct 26892 ATCCAGGTGTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTGCTGGGTAAGTTT 26833 Query 350564 ACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGAT 350623 || | ||||| || ||| | || |||||||||||||| ||| |||||||| Sbjct 26832 GAGCTTTCGGGTATTCCCCCGGCTCCTCGTGGTGTTCCTCAGATTGAGGTCACTTTCGAT 26773 Query 350624 ATTGAT 350629 | ||| Sbjct 26772 GTCGAT 26767 >seq188 Length=126406 Score = 93.3 bits (102), Expect = 1e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 378232 ATATAACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATT 378291 || |||||||||| | ||||| || ||||||||||| | ||| |||||||| |||| Sbjct 12787 ATGTAACCAGTTTCAGCTGTTTTCACAGCAGTATCAATCAGACCTTCACGACCAGCCATG 12846 Query 378292 GCATGGAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCT 378351 ||||||||||| |||||| | ||||| || | || | | ||| |||||| ||| ||| Sbjct 12847 GCATGGAAGAAGAATTCATGCGCTGTAAGACCTCGAAGATACGAATTCTCAACAAAGCCT 12906 Query 378352 C 378352 | Sbjct 12907 C 12907 >seq287 Length=95607 Score = 87.8 bits (96), Expect = 5e-12 Identities = 220/333 (66%), Gaps = 5/333 (2%) Strand=Plus/Minus Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| | ||||| || || | || | | || || | ||||| ||||| Sbjct 82700 AAGATGAAGGAGACCGCTGAGGCTTACCTGGGCCACAAGGTCACCCACGCTGTCGTTACT 82641 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 || || ||||| || ||||| |||||||| || || || || || || | || || Sbjct 82640 GTGCCGGCCTACTTCAATGACGCCCAGCGCCAGGCCACCAAGGACGCCGGTACGATCGCA 82581 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || | | || || | || | || || ||||| || || || || || || || || Sbjct 82580 GGTCTCGAGGTCCTCCGCATTGTGAACGAGCCCACCGCGGCTGCCATCGCCTACGGTCTG 82521 Query 349742 GATAA-AATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800 || || || ||| | || | || || | | ||| | ||||||||||| || Sbjct 82520 GACAAGAAGGAGGGC----GAGTCGCAGATCATTGTGTATGACCTGGGTGGTGGTACCTT 82465 Query 349801 TGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGA 349860 |||||| || || || || |||| ||| | ||||| || || || |||||||| Sbjct 82464 TGATGTCTCGCTTCTGACCATTGACTCGGGTGTGTTTGAGGTGCTTGCTACGGCTGGTGA 82405 Query 349861 TACACATCTTGGTGGAGAAGATTTTGATAATCG 349893 || ||||| ||||| || || ||||| || || Sbjct 82404 CACTCATCTCGGTGGTGAGGACTTTGACAACCG 82372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515239470482507