Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264715.1_202015-08-
11] 769 sequences; 7,562,283 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq206 187 5e-42
seq609 158 3e-33
seq236 123 5e-23
seq761 96.9 7e-15
>seq206
Length=8409
Score = 187 bits (206), Expect = 5e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | |||||| || || ||||||||||||||
Sbjct 2426 ACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 2485
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|||||||| |||||||| || || || ||||| ||||||| || |||||||| ||
Sbjct 2486 CAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGG 2545
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| || || || | ||||| ||||| |||| || ||
Sbjct 2546 GATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCAC 2605
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| || || | ||||| ||||| | |||||
Sbjct 2606 CTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 2653
>seq609
Length=45697
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944
||||| || || || | ||||| || || || ||||||||||| |||||||| ||
Sbjct 39409 CGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCG 39468
Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004
||||| || || || || || ||||||| ||| |||||||| || || |||||||||
Sbjct 39469 TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTG 39528
Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064
|| |||||||| || || || | ||||| |||||||| | ||||| || || || |||
Sbjct 39529 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATC 39588
Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || |||| |||||| ||||| || |||||
Sbjct 39589 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 39623
>seq236
Length=5533
Score = 123 bits (136), Expect = 5e-23
Identities = 128/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| ||||| || || || || || | |||||| || || ||||| |||||||||
Sbjct 798 ACCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACT 739
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || |||||||| ||||| || || |||||||||| || || ||||| |||
Sbjct 738 CAGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGG 679
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039
||| ||||||||||| |||||||| | || || | ||| ||| |||
Sbjct 678 AATGCCCTCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTC 631
>seq761
Length=21331
Score = 96.9 bits (106), Expect = 7e-15
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 316975 TCGGATCCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTT---CGTCGGG 317031
|| || ||||||||||| ||||| || || ||| | | | |||| || ||||
Sbjct 10656 TCCGAGCCGTCGAGGTCGTGCTCGACGTAC-CAGGTGC--GGACCTCCTCAGGCGACGGG 10712
Query 317032 AACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTG 317091
|| || || | ||| |||||| || || | |||||| |||||||| || | ||| ||
Sbjct 10713 AAGCCCTCGACCTGGCCGTTCTGGATGGCGCGCATCAGGGTCGACTTACCGGAACCGTTA 10772
Query 317092 GGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGA 317151
| || || ||||| || || | || ||| || | || | ||||||| |||
Sbjct 10773 CGACCACAGAGACCGTAGCGGTGGCCACGCTTGAGGCGCAGGGTGGCGGTGTTCAGCAGA 10832
Query 317152 ATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
||||| |||| || ||||| ||||||| ||| | |||||||||||||||
Sbjct 10833 ATCTTGGCACCGTAGGCCAGCGAGAACTGACAGTTACACAGGTCCTCGCC 10882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046728886674926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |