Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264715.1_202015-08-
11] 769 sequences; 7,562,283 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq609 154 1e-32
seq206 150 2e-31
seq236 123 2e-23
seq179 91.5 1e-13
>seq609
Length=45697
Score = 154 bits (170), Expect = 1e-32
Identities = 163/213 (77%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| || ||||| |||||||||||||||||||| |||||| || ||||| |||| ||
Sbjct 39414 CACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTC 39473
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772
||||||||| || ||||| ||||| ||||||||||||| || | || ||||||||||
Sbjct 39474 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTG 39533
Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
||| || ||| || | || | ||||| |||||| ||||| | || |||||
Sbjct 39534 GATCTTGGCCTTGACATTGTCG--ATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 39591
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || ||||| ||||| ||||| || ||||||
Sbjct 39592 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 39624
>seq206
Length=8409
Score = 150 bits (166), Expect = 2e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | ||| || || ||||||||||||||||| ||||| ||||||
Sbjct 2427 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 2486
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||||||||||||||| ||||||||||||||||||| ||
Sbjct 2487 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 2546
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| | |||||||||| ||| || ||||| | | |||||| |||||||||
Sbjct 2547 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 2606
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866
|| | || ||||| || || || || ||||| ||||| | |||||| ||
Sbjct 2607 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGTA 2657
>seq236
Length=5533
Score = 123 bits (136), Expect = 2e-23
Identities = 181/255 (71%), Gaps = 27/255 (11%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | || || |||||||||||||||||||| || || |||||
Sbjct 797 CCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTC 738
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || || || |||||||| || || ||||||||||| ||||||| |||
Sbjct 737 AGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 678
Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-------CTTCAACGACG------ACACAG 41798
| || |||||||||| ||| || ||| | | | || || ||||
Sbjct 677 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTCGTATCACACACCA 618
Query 41799 TG-TCGCTCGACTC--------CAC-CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848
|| ||| |||| || ||| ||||| ||| || ||||| || || || ||||||
Sbjct 617 TGCTCGATCGAGTCGCTGCTCTCACACTCCAGCGTAATTGTTTTCCCTGTAAGTGTCTTT 558
Query 41849 ACGAAAATCTGCATG 41863
|||||||||||||||
Sbjct 557 ACGAAAATCTGCATG 543
>seq179
Length=15069
Score = 91.5 bits (100), Expect = 1e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| || ||||||||||||||||||||||||||||||
Sbjct 14977 GCCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCT 15036
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGC 41727
|| ||||| | || || ||||||||||||||
Sbjct 15037 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGC 15069
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462299556102800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |