Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264925.1_202015-08-
11] 824 sequences; 7,546,902 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq618 158 1e-33
seq218 145 6e-30
seq245 89.7 4e-13
>seq618
Length=45605
Score = 158 bits (174), Expect = 1e-33
Identities = 158/205 (77%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
|||||| ||||||||||||||||||||||||||| |||| |||| |||| || || ||
Sbjct 6279 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTG 6220
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || ||||| |||| ||||||||||| ||||| | |||||||||||| || ||
Sbjct 6219 CTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 6160
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | ||||| ||| ||||| | ||||||||||||||| ||
Sbjct 6159 GGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGT 6100
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
||||||||| || ||||||||||||
Sbjct 6099 CAGAGTCTTGACGAAGATTTGCATG 6075
>seq218
Length=8399
Score = 145 bits (160), Expect = 6e-30
Identities = 155/205 (76%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| ||||||||||||||||| |||||||||||| |||| |||| | || ||||| ||
Sbjct 5962 GTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTG 5903
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| |||| ||||||||||| ||||| | ||||||||||||| || ||
Sbjct 5902 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 5843
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | ||||||||| | ||| |||||||| || ||
Sbjct 5842 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 5783
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||| || || | |||||||
Sbjct 5782 AAGGGTCTTGACGAACACTTGCATG 5758
>seq245
Length=5513
Score = 89.7 bits (98), Expect = 4e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||||||||||||||||||||| || |||||||| |||| || | || ||||||||
Sbjct 764 GTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTG 705
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || |||| ||||| ||||| || || | ||||||||||||
Sbjct 704 CTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCC 653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395071232457304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |