Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264925.1_202015-08- 11] 824 sequences; 7,546,902 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq180 111 2e-19 >seq180 Length=19533 Score = 111 bits (122), Expect = 2e-19 Identities = 428/670 (64%), Gaps = 2/670 (0%) Strand=Plus/Plus Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 || ||||||| ||||| || || | | | || || ||| || ||||| |||||| Sbjct 13508 GGGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATC 13567 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 || || || | || || || | | | ||||| || || ||||| ||| Sbjct 13568 CACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGA 13627 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 || | || | | || || || |||||||| |||| ||| || || | | ||||| Sbjct 13628 TCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGG 13687 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 13688 CGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGC 13747 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTG 72288 | |||||| ||| |||| || || |||| ||| || || | |||||||| ||| Sbjct 13748 ACAATACCGTTGCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTG 13807 Query 72289 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 72348 || ||||| || || || ||| | || ||| | || || || | ||| Sbjct 13808 TGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGCGTG 13867 Query 72349 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 72408 || || || ||||| || || ||| |||| | | || || || ||||||||| Sbjct 13868 TCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGG 13927 Query 72409 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468 | || || ||||| || | ||| || || ||||| ||||| || || ||| Sbjct 13928 GGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGAC 13987 Query 72469 A-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGAC 72527 | |||| ||||||||||| || || | | ||| || || || || ||||| Sbjct 13988 ATGTAG-TTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGAC 14046 Query 72528 ACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA 72587 ||||| | ||| ||||| || | || | | |||| ||| || || || |||||| Sbjct 14047 GCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGATCCGCAGCAGGTAGGA 14106 Query 72588 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 72647 || | || || || ||||| ||||||| ||||| || |||||||| | | Sbjct 14107 GCGCTCGAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCGCTCGTAAATCACCGC 14166 Query 72648 CGAATTGAGT 72657 ||| | |||| Sbjct 14167 CGAGTCGAGT 14176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671132287266240