Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264925.1_202015-08- 11] 824 sequences; 7,546,902 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq213 226 5e-54 seq218 143 5e-29 seq820 129 1e-24 seq618 116 7e-21 >seq213 Length=9698 Score = 226 bits (250), Expect = 5e-54 Identities = 594/891 (67%), Gaps = 29/891 (3%) Strand=Plus/Minus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 ||||| ||||| || || | || ||||||||||| ||||| |||||||||| ||| Sbjct 2891 ACGCCGGCCTTGGCATAGTCGGCAACGCGGCGCTCGAAAAAGTTCGACTTGCCCTGGAGC 2832 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 || ||| |||||| ||||| ||||||||| | | | ||||| |||| ||||| Sbjct 2831 GAGATGTTCTCCATAAAGTCGAAGGGGTTCGTCGAGTTGTAGTGCTTCGGGTTGCCGAG- 2773 Query 10059 GCTG-TGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCAT 10117 | || || | |||||| ||||| ||||| |||||||||| ||| ||| || |||||| Sbjct 2772 GTTGACGAGCAGGCGGTCCGCCACAAACTCAATGTACTGGCACATGAGGCGCGCGTTCAT 2713 Query 10118 GCCAATCATGCGGCA-GGGGATGGCGTC--GCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 ||| |||| ||| | || | |||||| |||| ||||||| || |||| || || Sbjct 2712 GCCGATCA-GCGAAACAGGCAAGGCGTCAGTCAAA--AAGTCCTGCTCAATGGCCACAGC 2656 Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAAGG---GACAGCTTGTTCTCGAGCTTCGAATA 10231 || || ||||| || || |||| || | |||| ||| | | | || | Sbjct 2655 CTCGGTGATGATGCGGTTCACTGTGTCAGGGTGCGCACGCTTCTTCAGGTGGCT-GA--A 2599 Query 10232 CAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAA 10291 |||||| |||| | ||| |||||||| ||||| ||||| |||||| || || Sbjct 2598 CAGGAGACAGGCAAAGTCGGTGTGCAGGCCCTCATCGCGCGAGATGAGCTCGTTCGAGAA 2539 Query 10292 ACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGA 10351 |||||| |||||||| || || || |||||||| |||| | ||||| || || Sbjct 2538 CGACAGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGA 2479 Query 10352 GAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGA---AGGAGCGGTC 10408 ||| | | ||||| ||| | |||| || |||||||| | || ||| ||| Sbjct 2478 GAAAAAGATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTCCGAGAACGAGGCGCGCCT 2419 Query 10409 GCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGAT 10468 | ||| | | | ||||||| | ||||||| ||| | |||||||||||||| Sbjct 2418 GTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGACGACGGGGATCGTCTCGAT 2359 Query 10469 AGCCTCGAAGAGCTTGTTAC---GCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAG 10525 ||| | |||||| | || |||| | |||| | || | | || | ||| || Sbjct 2358 AGCGTTGAAGAGAAACTCACGCTGCTCCGGCTCG-CGGATGTACGTG--TCGATGAGGAG 2302 Query 10526 GGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGC 10585 ||||| ||| ||||| | |||| | |||| | ||||||| || || Sbjct 2301 CGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGC 2242 Query 10586 CGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATC 10645 | || | || || || || ||| | | ||||||||| | || || || || Sbjct 2241 CTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATACCGTC 2182 Query 10646 GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA---G 10702 | ||||||||| | |||| ||| | | ||||||||||||| ||||||| | Sbjct 2181 CGAAGCAGCAAAGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCG 2122 Query 10703 TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGT 10762 | || |||||| || |||| ||| | | |||||| |||||||||| | Sbjct 2121 GTGGTC---CCAGTCGTGCAAGTCCTTCGAGAGGTCCATCTCCTCGGCGGTCCAGAACGA 2065 Query 10763 GGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 ||| ||||||||||||||||||| | || ||| |||| ||||| ||||| Sbjct 2064 GGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAA 2014 >seq218 Length=8399 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| || | ||| |||||| ||| || |||||||| || ||| Sbjct 5985 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 5926 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || || | |||||||| || || Sbjct 5925 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 5866 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| ||||| || |||||| ||||| | || || || Sbjct 5865 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 5806 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || |||||||||||||| | ||||| Sbjct 5805 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 5759 >seq820 Length=21345 Score = 129 bits (142), Expect = 1e-24 Identities = 677/1067 (63%), Gaps = 58/1067 (5%) Strand=Plus/Plus Query 224956 CTCCAGGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAG 225015 ||||||||||| || | || ||||| | ||||||| || ||| ||||||| Sbjct 9872 CTCCAGGTCCTCACCGGTCTGGTAACGCCAGAGCATGTACTCCAGCGGCGTCTTGTCCAG 9931 Query 225016 GTGGTTCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATG 225075 ||| | ||||| |||||||| || |||||||| ||||| | ||| || ||| || || Sbjct 9932 GTGCTGGTCAATGTGGTGGAACGCGTGCTGGGCAACGTAACCAATGACCAGGTTAGGGTG 9991 Query 225076 CTTCCACACAGAGC-CCCGAGTCGGT-TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTA 225133 |||||||| | | ||||||| || | | || ||| | | ||| | ||||| Sbjct 9992 CTTCCACA--GCTCACCCGAGTTGGGCTCCGTGTCACCGACCACCAGCTTCACCAGCGTC 10049 Query 225134 GTCTTGCCCGCACCATTGGGGCCAATCACGCCAATCCGGGATGACATTGCAACCTGC--- 225190 | ||| |||| ||| ||||| || | ||| | | || || |||| | | |||| Sbjct 10050 GACTTACCCGAACCGTTGGGACCCAGCACAGCCACACGCGACGACAGCGACAGCTGCATC 10109 Query 225191 GAGTTC--ACG---TTGCTGAAGATCTCAGG---GCCAGTTTGGTAAGCAAAGGCCACGC 225242 ||| | ||| |||| | | | || ||| | |||| ||| ||||| Sbjct 10110 GAGATACTACGCAATTGCGG-----CGCCGGCGTGCCGG---GGTACTGGAAGACCACGT 10161 Query 225243 CACGCAGCTTCATGATGGCACGGTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGG 225302 |||||| ||||| || | ||||||| | | ||| ||||| | | ||| | || Sbjct 10162 CACGCATCTTCACGAGCGACTTCTCCTTGGTCTTGACACCGTCCAGCAGCGGGGGGTTGG 10221 Query 225303 GGAACTCCCACTTGGTCACCGCGTCC---TTCAGGTCGTAGTAAGATGCAGCCTCGGGT- 225358 | | || || | || || || ||||| ||| || | |||||| || Sbjct 10222 GCAGCTTGAACGAGTAGTCCTCGCCCGAGTTCAGCTCGACATAGGCACGAGCCTCCGGCA 10281 Query 225359 --CGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCT 225416 ||||| ||| || || |||||| ||| ||| | ||| ||||| | ||| Sbjct 10282 CACGCTT---CACAAAGGCGTCCAGGTTGCCGGGGTAACGCTTGATCTTGAAGCGGTTCA 10338 Query 225417 CGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGA 225476 || | | ||| | | ||||| ||| ||||| |||||||| |||||||||| Sbjct 10339 GGT---GCAGAATGTCGGTACACACGTCGTTCAGGAACTTGGAGTCGTGCGACACAATGA 10395 Query 225477 TGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGT 225536 | || | ||||||| || | | || |||||| ||| ||||||||| | |||| Sbjct 10396 TTGAGGTGGCGTTCGTAGTGCACAGGTAGTTCGTGAT---CCAGGCCACGTTGATCACGT 10452 Query 225537 CCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCG 225596 ||| |||||| || || || || || ||||| ||||| || | | || | ||| || | Sbjct 10453 CCAAGTGGTTGGTCGGCTCATCGAGCAGCAGAATGTCGGCCTTGAACAGCACGGCACGGG 10512 Query 225597 TGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGATTGAAACAGAGTG-CTTA 225655 || | |||||||| ||||| || || ||||||| ||| | | | | || | Sbjct 10513 CCAGGGCGAGCTTCATCTTCCAACCACCCGACAGGGCCGTGATAGGACCGGCCTGACGCT 10572 Query 225656 GCTTCGTCAAAGCCGTACTCCAGGAGCGTCTGGATAATGCGCTCGGGAGAGCTGCGAGCG 225715 || ||||| ||||| ||| ||||||| | ||| || ||| | Sbjct 10573 GC-TCGTCGAAGCCCATCTCAGCCAGCGTCTTG---------GCGGCCGACTCGCG---G 10619 Query 225716 GCAACGTT--GG----GGTCGGACGAGAGGTAATCATATACGGTCATGTCCGAGACAGAC 225769 | ||||| || ||| | || | | || | | ||||| | || Sbjct 10620 TCGACGTTCAGGCGCTTGTCCTGCAGGATGAACTCCAGAATCGAAATGTCACCCTCCGAG 10679 Query 225770 GCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCC 225829 |||| | |||||| || |||||| || |||| || || ||||||||||| Sbjct 10680 CCGTCGAGGTCGTGCTCGACGTACCAGGTGCGGACCTCCTCAGGCGACGGGAAGCCCTCG 10739 Query 225830 AGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATG 225889 | |||||| || || || || | |||||| ||| || | ||||| |||| | Sbjct 10740 ACCTGGCCGTTCTGGATGGCGCGCATCAGGGTCGACTTACCGGAACCGTTACGACCACAG 10799 Query 225890 AGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCA 225949 || ||||| | | || ||||||| | ||| | || |||||| || |||||| || Sbjct 10800 AGACCGTAGCGGTGGCCACGCTTGAGGCGCAGGGTGGCGGTGTTCAGCAGAATCTTGGCA 10859 Query 225950 CCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 || ||||| || ||||||| || | ||||||||||| |||||||| Sbjct 10860 CCGTAGGCCAGCGAGAACTGACAGTTACACAGGTCCTCGCCCTCCTC 10906 Score = 87.8 bits (96), Expect = 3e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 224507 AGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGC 224566 |||||||| ||||| | ||||||||||||||| ||||| | ||| | |||||| || Sbjct 9408 AGCGACTCACGGTCCAAGAAGTTCGTCGGCTCGTCCAGCACGATGATGTGGGGCATACGC 9467 Query 224567 CACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGC 224626 ||| || ||||| | ||| | ||| ||||||||||| || || || || || ||| Sbjct 9468 CACGTCGCAGCACCGAGCACGACCTTGACCTTCTGACCACCCGAAAGACCACGCATCGTG 9527 Query 224627 GAGTGAGTCGTGAATTCGGGGTCAAGACCAA 224657 ||| | ||||| || | || ||||||| Sbjct 9528 TTGTGCGAGGTGAACTCACGCTCGAGACCAA 9558 >seq618 Length=45605 Score = 116 bits (128), Expect = 7e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || ||| ||| || || ||||| || ||| || || | || || || | ||| Sbjct 6279 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTG 6220 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || ||||| || || | |||||||| || || ||||| |||||||| || ||||| Sbjct 6219 CTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 6160 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||||| ||||| ||||| | || || || || | ||| || || || || || Sbjct 6159 GGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGT 6100 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| || ||||| Sbjct 6099 CAGAGTCTTGACGAAGATTTGCAT 6076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921612907289280