Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264925.1_202015-08- 11] 824 sequences; 7,546,902 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq180 264 1e-65 seq213 197 1e-45 seq618 134 1e-26 seq218 107 2e-18 >seq180 Length=19533 Score = 264 bits (292), Expect = 1e-65 Identities = 958/1469 (65%), Gaps = 65/1469 (4%) Strand=Plus/Plus Query 153025 ACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGA 153084 || |||||||||| || ||||| || || | ||| || | || || | ||||| ||| Sbjct 12639 ACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGT 12698 Query 153085 AAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACG 153144 | || |||||| | ||||| ||| || || ||| ||||| || ||||||||| || Sbjct 12699 ACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCG 12758 Query 153145 CCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAAT 153204 ||| || || || || |||| |||||| ||| | |||| | || ||| | Sbjct 12759 CCATCAGCAGCGAGTTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGT 12818 Query 153205 CCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGG 153264 ||||||| ||||||| || |||||||||||||||||| | | || | ||| | Sbjct 12819 CCCACAGGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAG 12878 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGG--GCCAGTTCGCAGCTAGCCTC 153322 | ||||| | |||| ||| |||| | | || ||||| || ||||| ||| Sbjct 12879 GGCTGCCCTCGTACGTCTCGTATGTGCCAT--ATTCGGCCGCCAGCTCACAGCTGCGCTC 12936 Query 153323 GAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCT 153382 | || ||| ||| ||||| || ||| || ||| || | | ||| || | ||| Sbjct 12937 CAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCT 12996 Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442 ||| |||| || || | || || || ||||| || ||||||| ||||| ||||| Sbjct 12997 GTCGAACGGATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGAT 13056 Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502 ||| || ||| | ||| ||| | || ||| | | || |||| ||| |||||| Sbjct 13057 GGGGCGGTGCCGCATGTTCGAGCGACGTGCACTCTCCACAGGGTAGTAGTTGATATCGAT 13116 Query 153503 AATTTTGTTGAGGTT-GCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCAT 153561 || ||| ||||| ||| ||||||||| | | | | || | ||| | | Sbjct 13117 GATGCGGTTCAGGTTCTTGCA-CACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGT 13175 Query 153562 AGGTCATTTCGTCG-ACGCGTACGCATCGATTCACG--------GCAATAGACGCCAGAT 153612 | ||| |||| | || || | | || || ||| ||||| |||||||| | Sbjct 13176 ATGTC--TTCGAGGCACCGGTGC-CCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGT 13232 Query 153613 TACAGACGGCCGTCTC-TTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTG 153671 | || || || ||||| | ||||| |||||||| | ||||| | ||| ||||| | Sbjct 13233 TGCACACAGCTGTCTCGTCCGGCG-AGCTGTACTCGATAATCTCCGTGCACAGGTTCGAG 13291 Query 153672 CATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGC 153731 | || || ||||| || | ||| || || ||||| || || ||| ||| | || Sbjct 13292 CTCTTGATCGTGCCCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGG 13351 Query 153732 ATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTA-TGCAGGTCCTGCGC 153790 | | || ||| ||||| | ||||| |||| ||| | | || ||| | |||||| Sbjct 13352 ACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT-AGCGTACCACAGCTTCTGCGC 13410 Query 153791 --TCGCA-CCCGC-TGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAA 153846 | || ||| || | ||||||||||| |||||| ||||||||| |||| Sbjct 13411 CTTGACAGAGCGCTTGGC----GCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAA 13466 Query 153847 ACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACA 153906 |||| ||||| |||||||| || || || || |||| || |||||||||||||| Sbjct 13467 ACTCCTCGCCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCA-- 13524 Query 153907 TATCGTCGGCGTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACA 153960 |||| |||| ||| || |||||||||||||| || | ||| ||||| | Sbjct 13525 ----GTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGA 13580 Query 153961 TGAGGTCGCGCGCCTTGCA-ATCCTCCGCGCCCATG----TTGCGTTTCAGATTGAGCAC 154015 |||||||||| | ||| |||||| | ||||| ||||| ||||| | | Sbjct 13581 ACAGGTCGCGCG-CGCGCACTTCCTCCTTG-CCATGGTTCTTGCG---CAGATCAATAAA 13635 Query 154016 GCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TT 154072 | | | ||| | |||||| || || | ||||| || | ||| || ||| || Sbjct 13636 TTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTT 13695 Query 154073 TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCC 154132 |||||||| || |||| |||| || | |||||| | ||||| | |||||| | | || Sbjct 13696 GCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACC 13755 Query 154133 GCTTGC-GGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGT 154191 | |||| ||||| || ||| | ||| || || | | || | || Sbjct 13756 G-TTGCTCACACCGTTCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGT 13814 Query 154192 TAACGCCAATGCCGCC-GCCGTACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGTCCTG 154247 | | ||||| ||||| ||||| ||| |||| || ||| ||| ||||| | Sbjct 13815 TCAGACCAATACCGCCGGCCGT-CTTGCTGATCATCGCA---CAGGTCTTGAGCGTGTCG 13870 Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 || || || ||||| ||||| | | | | ||| ||||| ||||||| || Sbjct 13871 TATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGACATTTGGGGG 13930 Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATC 154367 || |||| || || || ||||| || |||||| ||||| || | | ||| Sbjct 13931 TTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTCTCGGACATG 13990 Query 154368 ATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGC 154427 | |||||| ||||| ||| | | || |||||||| ||||||| ||||||||| Sbjct 13991 TAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGACGGCGACGCGC 14050 Query 154428 ATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||||||| || || || || || Sbjct 14051 ATGAGCATGTGCTGGGGGCGCTCCGCAAC 14079 >seq213 Length=9698 Score = 197 bits (218), Expect = 1e-45 Identities = 323/461 (70%), Gaps = 11/461 (2%) Strand=Plus/Plus Query 52382 CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGG 52441 |||| || | | |||||| | |||||||| ||| ||||||||| | ||||| || || Sbjct 2424 CGCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGG 2483 Query 52442 CAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAG 52501 | |||||| ||||||| | | || | | ||| | ||||| || ||| ||||| Sbjct 2484 CTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTC 2543 Query 52502 CAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAA 52561 |||||| | || |||||||| || || |||||||| |||||||| || ||| | || Sbjct 2544 GAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTTCAG 2603 Query 52562 GACGCGCGTGACCGAAAAATTGG-ATTCGGACAC---GATCCTGAGCATGTTCAAGGAGG 52617 | | ||| ||| | | | | ||||| || || |||| ||| |||| Sbjct 2604 C---CACCTGAA-GAAGCGTGCGCACCCTGACACAGTGAACC---GCATCATCACCGAGG 2656 Query 52618 CGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGA 52677 | ||||| || || |||| ||||| || | ||| |||| || |||| | ||||||| Sbjct 2657 CTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGA 2716 Query 52678 ACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737 |||||| ||||||| ||||||| |||||||||||||| || ||| | || | |||| Sbjct 2717 ACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCG 2776 Query 52738 GGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTG 52797 | | || ||| ||| |||| | || || || || |||||| | ||||| ||||| Sbjct 2777 GCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCC 2836 Query 52798 AGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTAT 52838 |||||||| | |||||||||||| || || | ||| ||| Sbjct 2837 AGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTAT 2877 >seq618 Length=45605 Score = 134 bits (148), Expect = 1e-26 Identities = 149/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||||| || || ||||||||| || ||||| | | Sbjct 6267 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 6208 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| |||||||||||||||||||| || || || ||||| ||| || || | ||| Sbjct 6207 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 6148 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||| | |||||| ||||| | || | ||| || ||||||||||| || | Sbjct 6147 G-TCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGA 6089 Query 138602 CAAAAATCTGCATGGC 138617 | || || |||||||| Sbjct 6088 CGAAGATTTGCATGGC 6073 >seq218 Length=8399 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || ||||| || || || |||| | Sbjct 5950 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAA 5891 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| || ||||||||||||||||| ||||| || ||||| ||| || || | | Sbjct 5890 GATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 5831 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||||||||| || | ||| || || || || || || || Sbjct 5830 CTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGAC 5771 Query 138603 AAAAATCTGCATGG 138616 || | ||||||| Sbjct 5770 GAACACTTGCATGG 5757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496257288497280