Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264925.1_202015-08- 11] 824 sequences; 7,546,902 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq213 147 2e-30 seq618 136 4e-27 seq218 113 4e-20 seq180 107 2e-18 >seq213 Length=9698 Score = 147 bits (162), Expect = 2e-30 Identities = 298/441 (68%), Gaps = 21/441 (5%) Strand=Plus/Plus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 || || ||| |||||||||| |||| ||||||||| ||||| | || || | | Sbjct 2449 GCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTC 2508 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||| || || |||| |||||||| |||||| | || || Sbjct 2509 AAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAG 2568 Query 47268 GGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGTCGATCAAAAGTTGGA 47326 |||||||||||| |||||||||||||| | || | || || | ||| Sbjct 2569 GGCCTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGA-------AGAAG----- 2616 Query 47327 CGTGCCCACCGT----CAGCGA----CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAG 47378 ||||| |||| | ||| || ||| | |||| || || ||||||||| ||| Sbjct 2617 CGTGCGCACCCTGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGAC 2676 Query 47379 TTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAG 47438 ||||| | || || |||| | || | | || ||||||||| | ||| | || Sbjct 2677 TTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAG 2736 Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCAC 47498 ||||| || ||||| || |||||||||||||| | || | || ||| ||| || Sbjct 2737 TACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAAC 2796 Query 47499 ACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTC 47558 | ||| || ||||| |||||| | ||||| |||||| |||||||| | ||||||||| Sbjct 2797 TCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTC 2856 Query 47559 GAGAAGCGCGTCGGCGAATAT 47579 ||| ||||| | ||| ||| Sbjct 2857 GAGCGCCGCGTTGCCGACTAT 2877 >seq618 Length=45605 Score = 136 bits (150), Expect = 4e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| || ||||||| || || ||||| || |||||| | Sbjct 6267 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 6208 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || ||||| ||||||||||||||| ||| || ||||| | Sbjct 6207 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 6148 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| |||||| || | ||| | ||| ||||| |||||||| || || Sbjct 6147 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 6088 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 6087 GAAGATTTGCATGGC 6073 >seq218 Length=8399 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||| | || | ||| ||| || || || ||||| ||| Sbjct 5988 GCACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCG 5929 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || ||||||| ||| || ||||| || || ||| |||||| ||||| || || ||| Sbjct 5928 CTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGA 5869 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 5868 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 5809 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || |||| ||| | ||| || ||||| || || || || || | ||||||| Sbjct 5808 ACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 5757 >seq180 Length=19533 Score = 107 bits (118), Expect = 2e-18 Identities = 941/1491 (63%), Gaps = 96/1491 (6%) Strand=Plus/Plus Query 146060 ACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGA 146119 || ||||||||||||| ||||| ||||| || || || | || || | |||||| ||| Sbjct 12639 ACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGT 12698 Query 146120 ACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACG 146179 ||||||| || |||||||| || || ||||| ||| | || || |||||| || Sbjct 12699 ACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCG 12758 Query 146180 CCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAA 146238 ||| ||||| ||||| | || ||||| || | ||||||| || || || ||| Sbjct 12759 CCATCAGCAGCGAGTTGCGCAGACCGTG-CTGGGCAATCTTTGCCTTGAGCGAGGCCCAG 12817 Query 146239 TTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC--GCGGA 146296 | ||||| | |||| || | || | ||||||| |||| ||| ||| Sbjct 12818 TCCCACA---GGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAG 12874 Query 146297 ACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTG--GCCAGTTCGCAGCT 146354 ||||| || |||||||| || || | || | || | ||||| || ||||| Sbjct 12875 GCAGGG--CTGCCCTCGTACGTCTCGTATGTGCCAT--ATTCGGCCGCCAGCTCACAGCT 12930 Query 146355 AGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATC-----ATGTAGTTGACGCTCCTG 146409 |||| |||| | ||| |||||||| |||| || || | ||| Sbjct 12931 GCGCTCCAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGC----- 12985 Query 146410 GCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTAT 146468 ||||||| ||||||| | || ||| | | | || || || ||||| || ||||| | Sbjct 12986 GCCTCCTGGCTGTCGAACGG-ATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGAC 13044 Query 146469 CCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGC---AGTGGGATA 146525 |||| ||| | ||||||||| | |||| | || | || | | | ||| || Sbjct 13045 ACCGATACCGATGGGGCGGTGCCGCATGTTCGAG--CGACGTGCACTCTCCACAGGG-TA 13101 Query 146526 GTGGTTGCTGTCGATGATCTTGTTGAGATTAC-GCACGACAATTTTCGTCAAACGATTCA 146584 || |||| | |||||||| ||| || || |||| || | ||||| || || | Sbjct 13102 GTAGTTGATATCGATGATGCGGTTCAGGTTCTTGCAC-ACCACTTTCGACA--CG-TCGT 13157 Query 146585 GCAGGACAT---AGTCAAATGTTTTAGTTTTAACGTTGACG-CACTT---GTTGACGGCG 146637 ||||| | ||| |||| || | | || || | || | || | | ||| Sbjct 13158 GCAGGCGTTGGAAGTTGTATGTCTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCG 13217 Query 146638 --ATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGG 146695 || || |||| ||| || || || ||||||||| || |||| | |||||| | Sbjct 13218 CAATCGACGCCAGGTTGCACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCG 13277 Query 146696 CGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTG---TTGC 146752 ||| ||||| || |||||| |||||| || || |||||||| |||| || Sbjct 13278 TGCACAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACT---CTTGCGGTTCG 13334 Query 146753 AGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATC 146812 | ||||||||| || | | || || || || | | | ||||| ||| | | Sbjct 13335 CCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT--AGC 13392 Query 146813 TAAACAAATCT-CTG-GCCTTTACTTGTCTTTCGTACAGTTTATTCTTTTCGTATTTCTC 146870 | || | || ||| ||||| || | | | | | ||||| ||||| Sbjct 13393 GTACCACAGCTTCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTC 13452 Query 146871 GTACAATATTTCAAAA--CTAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGA 146928 ||||| ||||| || | || || ||| || || || ||| ||| Sbjct 13453 GTACAGAGCATCAAACTCCTCG--CCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGG 13510 Query 146929 CAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAA 146988 || | ||||||||| || |||| | || || ||| |||| |||||||||||| Sbjct 13511 CACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCAC 13570 Query 146989 AGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTG 147048 || |||| | || |||||| || | ||||| ||| ||| | | | || | Sbjct 13571 AGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCC-ATGGTTCTTGCGCAGATC 13629 Query 147049 AGGACAT-CGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCG 147107 | | || | ||| |||| ||||| ||||||| ||| || | ||||| || Sbjct 13630 AATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCG 13689 Query 147108 CTTA---CCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACAC 147164 ||| |||||||| || |||| |||| || |||| ||| | || || | ||||| ||| Sbjct 13690 CTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCAC 13749 Query 147165 GAGGCCG---------CCGGATTTTGTGGTGCCGTTGTATTGAGCGCTGACGC------- 147208 | ||| ||| || ||| | || |||| |||| | | ||| Sbjct 13750 AATACCGTTGCTCACACCG---TTCGTGCCGGCGATGTAC-GAGCCC-GTCGCACGAATG 13804 Query 147209 -TTTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGC---GGACTCGTGC 147264 | || | | |||| || | ||| ||| || || |||| || || || | || Sbjct 13805 TTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGC 13864 Query 147265 AAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACAC 147324 || | ||| || || ||||| ||| ||||| || | ||||| ||||| || Sbjct 13865 ---GTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 13921 Query 147325 ATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGC 147382 |||||||| |||||| || ||||| || || ||||| || || | | | Sbjct 13922 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 13981 Query 147383 CCAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCA 147442 | ||| | | ||| ||||| || || |||||| ||||| |||||||| ||| | | Sbjct 13982 TCGGACATGT-AGTTG-TACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 14039 Query 147443 GGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGA 147493 ||||||||||||||||||||||||||| || ||||||| | | |||||| Sbjct 14040 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGA 14090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475495902341760