Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264925.1_202015-08- 11] 824 sequences; 7,546,902 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq180 289 5e-73 seq213 248 2e-60 >seq180 Length=19533 Score = 289 bits (320), Expect = 5e-73 Identities = 955/1466 (65%), Gaps = 53/1466 (4%) Strand=Plus/Plus Query 212684 GCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCAT 212743 || ||| || | ||| || ||| |||||| | || | | | | ||| |||||||| Sbjct 12418 GCTCAGGTGGATGTTGAGACTCTGGCTCTGGCACACAAAGGCGCCACGGTCTGCGGCCAT 12477 Query 212744 GTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTC 212803 || | || | ||||| || ||||||||| |||||| ||| | |||| || || Sbjct 12478 ATCGAGAATCACCTTCTGGCTGATCTCCCACACAGTCTTGTAGAGGGCCTTGATGTGGTC 12537 Query 212804 TGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTC 212863 |||| ||| | ||||||||| | || || | || | | || | | ||| Sbjct 12538 AGGGATGCCAGCGATGTTCTGGATTGAGCCGCCATGCGCAATAATCTTCTGCTTCATCGA 12597 Query 212864 CTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGAGGGTTGACTATCTGGA 212922 || |||||||||||| | || || || | | | ||| |||||||| | ||||| Sbjct 12598 GTCATTCCAGAGGCCCA-GCTCGACAAGCTCGCGCAGCAGCCACGGGTTGACCACCTGGA 12656 Query 212923 AGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGT 212982 | ||||| | ||||| | | | ||||| ||| ||||| ||||| | || ||||| Sbjct 12657 ACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCACTCGT 12716 Query 212983 TGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCC 213042 || || || ||||| ||| ||| || |||||||| |||| ||| || ||| | Sbjct 12717 TGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATCAGCAGCGAGTTGC 12776 Query 213043 TCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGT 213102 || ||||||| | | || | ||| ||||||||||| ||||| Sbjct 12777 GCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCA---------CAGGT 12827 Query 213103 CCT-CGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCC 213161 || || | | | |||||||||||| |||||| || ||| | | ||||||||| Sbjct 12828 CCGACGGCGTGCG-GTTCCACATGTCGTACTGCAGGAGGCCCTGCGAGGCAGGGCTGCCC 12886 Query 213162 TGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCG 213221 | ||| | ||| | ||||| || |||||||| ||| || || ||| || Sbjct 12887 TCGTACGTCTCGTATGTGCCATATTCGGCCGCCAGCTCACAGCTGCGCTCCAAGGCCGCA 12946 Query 213222 TAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC-TGG-----GGACGTG 213275 | ||| ||||| ||||| |||| | || ||| ||||| ||| | ||| Sbjct 12947 TGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGCGCCTCCTGGCTGTCGAACGGA 13006 Query 213276 AAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGT 213335 || ||| |||||| ||| |||| || || |||||||| ||||| |||||||| Sbjct 13007 TAGCCCATGATCATG------AACGCATCGGCAAGGCCCTGGACACCGATACCGATGGGG 13060 Query 213336 CTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGAT 213394 | ||| | || ||| || | | |||||| |||| ||||| ||||| |||||||| Sbjct 13061 CGGTGCCGCATGTTCGAGCGACGTGCACTC-TCCACAGGGTAGTAGTTGATATCGATGAT 13119 Query 213395 CTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACA- 213453 ||| ||||| | ||||||| | || | | |||| | | ||| | Sbjct 13120 GCGGTTCAGGTTCTTGCACACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTATGT 13179 Query 213454 ---CGTAGCCCCCGT--CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAAC 213508 || || || || ||| | |||| ||||| || || ||||||||||| || Sbjct 13180 CTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCGCAATCGACGCCAGGTTGCACAC 13239 Query 213509 GGC---CACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCG 213565 || | | ||| | ||| ||||||| || ||||| ||||||||||| || Sbjct 13240 AGCTGTCTCGTCCGGCGAGC---TGTACTCGATAATCTCCGTGCACAGGTTCGAGCTCTT 13296 Query 213566 GATGGTGCCCAGGTTCTGGTGGTTTGACT-TTGCG-TTGGCAGAATCCTTGTAGAGCATG 213623 ||| ||||||||||||| ||||| ||| ||||| || || || |||||||| || | Sbjct 13297 GATCGTGCCCAGGTTCTTCTGGTT--ACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACA 13354 Query 213624 TAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTG 213683 | || || ||||| | || | | | || || | ||| || | | |||||| Sbjct 13355 AAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTG 13414 Query 213684 ACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTC 213742 || ||| || | ||| | | || |||||||| ||||| || | | || || Sbjct 13415 ACAGAGCGCTTGGCG----CGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTC 13470 Query 213743 GTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCC 213801 | ||| || | | | |||| || || || ||||| ||||| || |||||| | Sbjct 13471 CTCGCCATAGCAGTCAG-CCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGC 13529 Query 213802 CGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCC 213861 ||| | | ||| | |||||||||| || || | ||||||||| ||||||||| | Sbjct 13530 CGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGC 13589 Query 213862 TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCG 213921 | | | || ||| ||| ||| ||||||||||| | ||| ||||| | ||||| Sbjct 13590 GCGCGCGCACTTCCTCCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCG 13649 Query 213922 CGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCA 213978 |||||||||||||| |||||| ||||||||||||| || | |||||||||||||||| Sbjct 13650 AGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCA 13709 Query 213979 CCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGT 214038 | | ||| ||||| | | ||| || | ||| || | |||||| | |||| Sbjct 13710 CGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGT 13769 Query 214039 TGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCAC 214098 | || || || || |||||||| | || | | |||| ||| || || || || | Sbjct 13770 TCGTGCCGGCGATGTACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGC 13829 Query 214099 CGGCGTACTTGGAGATCATGGCGCAG 214124 |||| |||| |||||| || ||| Sbjct 13830 CGGCCGTCTTGCTGATCATCGCACAG 13855 >seq213 Length=9698 Score = 248 bits (274), Expect = 2e-60 Identities = 559/829 (67%), Gaps = 26/829 (3%) Strand=Plus/Minus Query 47860 CTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGG 47919 ||| || ||||| | ||| |||| | ||||||||||||||| ||| ||||||||| | Sbjct 2859 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGT 2800 Query 47920 TGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTCG 47977 | ||| || | || || ||| | | | |||||| | ||||| || |||| Sbjct 2799 CGAGTTGTAGTGCTTCGGGTT--GCCGAGGTTGACGAGCAGGCGGTCCGCCACAAACTCA 2742 Query 47978 ATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTG 48037 ||||| | |||||||| ||||||||| || || || || ||||| || | || Sbjct 2741 ATGTACTGGCACATGAGGCGCGCGTTCATGCCGATCAGCGAAACAGGCAAGGCGTCAGTC 2682 Query 48038 AGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAAC-GCGGGACTCTGA 48096 | ||| |||| ||| || ||| || || | || | || || | | | || Sbjct 2681 AAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCACTGTGTCAGGGTGC 2622 Query 48097 GG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCT 48154 | | || || |||||| || | || | ||||||||||| |||||| ||| Sbjct 2621 GCACGCTTCTT---CAGGTGGCTGA---ACAGGAGACAGGCAAAGTCGGTGTGCAGGCCC 2568 Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || || ||||||| |||| ||||| | ||||||||||||| || | || ||| Sbjct 2567 TCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCTTG 2508 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||| || | || || ||||| ||||| ||||||||||| || || || || || Sbjct 2507 AGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGCC 2448 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCC 48334 || | ||| ||| || ||| | |||| ||||||||| || ||||| || ||| Sbjct 2447 ACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCC 2388 Query 48335 TTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCG 48394 |||| ||||| | || |||||||| || || |||||| || ||| | || || Sbjct 2387 TTCTGCTTGACGACGGGGATCGTCTCGATAGCGTTGAAGAGAAACT--CACGCTGCTCCG 2330 Query 48395 TC-CGC-AACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTA 48449 | ||| | || || |||| ||| | |||| |||| ||||| | ||||| | Sbjct 2329 GCTCGCGGATGTACGTGTCGATGAGGAGC---GAGTACGTCTCCGAGTGGATGTTCTCCA 2273 Query 48450 TAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATC 48509 | ||||||||| ||||||||| | |||||| ||||||| || | | ||| | Sbjct 2272 TCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCTGCACCTCGGCGCTGAAGC 2213 Query 48510 TCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTT 48569 ||| | ||| ||||| ||||| || || || ||||||||||||||||| ||||| || Sbjct 2212 GCTCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGC 2153 Query 48570 TAAGGAAATGGCGCTCGTTGTGG---GTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCA 48626 | | || |||||||| |||| | || | | |||| | || | ||| || | Sbjct 2152 TCACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAAGTCCTTCGAGA 2093 Query 48627 GGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 |||||| || || | |||||||| || || || || |||||||| Sbjct 2092 GGTCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 2044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931523205212160