Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264925.1_202015-08- 11] 824 sequences; 7,546,902 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq180 172 7e-38 >seq180 Length=19533 Score = 172 bits (190), Expect = 7e-38 Identities = 607/930 (65%), Gaps = 21/930 (2%) Strand=Plus/Minus Query 75148 CTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATGGA 75207 |||||| |||| || || ||| ||| || | ||| || |||||| | ||| Sbjct 14131 CTTTGGCTTCAAGACGCTCGAGCGCTCCTACCTGCTGCGGATCAATGGCAAGGTTGCGGA 14072 Query 75208 AACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTC 75267 ||| ||| ||||| ||||||| ||||| ||||||||||||| || ||| | | Sbjct 14071 GCGCCCCCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGCGAGGACGTGGCGAG 14012 Query 75268 TGTCTTGGAGACATACGACAAGATGTCCCA--AGGTATGTTCATTCACGCAACACCAACC 75325 | | ||||| ||| || | |||||| | ||| | | || ||||| | || ||| Sbjct 14011 CGCGATCGAGACGTACAACTACATGTCCGAGAAGGCCTTTACA--CACGCGTCGCCGACC 13954 Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385 || |||||||| || || || | || || ||||| ||||||||| | | ||| Sbjct 13953 CTGTTCAATGCCGGCACGCCCAACCCCCAAATGTCGTCGTGCTTCCTTGTGAGTATGAAG 13894 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 || ||||| ||| | ||||| || | || || | | |||||| ||| ||| | Sbjct 13893 GACGACTCGATCGAGGGTATATACGACACGCTCAAGACCTGTGCGATGATCAGCAAGACG 13834 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGG 75504 || || |||||||| || ||||||| | | | || | |||||| ||| | Sbjct 13833 GCCGGCGGTATTGGTCTGAACATCCACAACATTCGTGCGACGGG--CTCGTACATCGCCG 13776 Query 75505 G-ACAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 | || || ||| | || | |||||| | || ||||| ||||| | ||| ||| ||| Sbjct 13775 GCACGAACGGTGTGAGCA-ACGGTATTGTGCCCATGCTCCGCGTGTACAACAACACGGCG 13717 Query 75563 CGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618 ||||| || | || | | ||| | || ||| || | ||| ||||| |||| || Sbjct 13716 CGCTACGTGGACCAGG-GCGGCAACAAGCGCCCGGGCGCCTTTGCGATCTACCTGGAGCC 13658 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 ||||| | || | | || || |||| | || ||||| || | || || | Sbjct 13657 GTGGCACTCGGACGTTTTTGAATTTATTGATCTGCGCAAGAACCATGGCAAGGAGGAAGT 13598 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 || | || || || | ||||||||||| || || |||||| || || || Sbjct 13597 GCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGCGCCGTGTCGA 13538 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGG 75797 || || | ||||| || | || || | | || |||||||| | ||| || Sbjct 13537 ACAGAACGGCGACTGGTCGCTGATGTGCCCCGCCGAGTGCCCAGGTCTGGCTGACTGCTA 13478 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857 ||| ||||||||||| || || ||| ||||| || ||||| | ||||| ||| Sbjct 13477 TGGC-GAGGAGTTTGATGCTCTGTACGAGAAGTACGAGCGCGAGGGCCGCGCCAA-GCGC 13420 Query 75858 -CTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 |||| | || ||| || | | ||| | ||||| ||| | | || | ||||| || | Sbjct 13419 TCTGT-CAAGGCGCAGAAGCTGTGGTACGCTATCCTCGAGGCGCAAATTGAGACGGGCAA 13361 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || | | | || |||||||| | ||| ||||||||||| ||||| |||| || Sbjct 13360 TCCTTTTGTCCTGTACAAGGACTCGGCGAACCGCAAGAGTAACCAGAAGAACCTGGGCAC 13301 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||||||||||| || || |||||||| ||| | ||||||| ||| ||||| || Sbjct 13300 GATCAAGAGCTCGAACCTGTGCACGGAGATTATCGAGTACAGCTCGCCGGACGAGACAGC 13241 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCC 76065 ||| ||||| |||| || || || || || Sbjct 13240 TGTGTGCAACCTGGCGTCGATTGCGCTGCC 13211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563455333120