Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F001264925.1_202015-08-
11] 824 sequences; 7,546,902 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq218 187 5e-42
seq618 158 3e-33
seq245 123 5e-23
seq820 96.9 7e-15
>seq218
Length=8399
Score = 187 bits (206), Expect = 5e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | |||||| || || ||||||||||||||
Sbjct 5986 ACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCT 5927
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|||||||| |||||||| || || || ||||| ||||||| || |||||||| ||
Sbjct 5926 CAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGG 5867
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||||| || || || | ||||| ||||| |||| || ||
Sbjct 5866 GATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCAC 5807
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| || || | ||||| ||||| | |||||
Sbjct 5806 CTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 5759
>seq618
Length=45605
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 282885 CGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCA 282944
||||| || || || | ||||| || || || ||||||||||| |||||||| ||
Sbjct 6290 CGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCG 6231
Query 282945 TCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTG 283004
||||| || || || || || ||||||| ||| |||||||| || || |||||||||
Sbjct 6230 TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTG 6171
Query 283005 TCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATC 283064
|| |||||||| || || || | ||||| |||||||| | ||||| || || || |||
Sbjct 6170 TCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATC 6111
Query 283065 GTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || |||| |||||| ||||| || |||||
Sbjct 6110 GTCTTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 6076
>seq245
Length=5513
Score = 123 bits (136), Expect = 5e-23
Identities = 128/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| ||||| || || || || || | |||||| || || ||||| |||||||||
Sbjct 788 ACCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACT 729
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || |||||||| ||||| || || |||||||||| || || ||||| |||
Sbjct 728 CAGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGG 669
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039
||| ||||||||||| |||||||| | || || | ||| ||| |||
Sbjct 668 AATGCCCTCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTC 621
>seq820
Length=21345
Score = 96.9 bits (106), Expect = 7e-15
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 316975 TCGGATCCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTT---CGTCGGG 317031
|| || ||||||||||| ||||| || || ||| | | | |||| || ||||
Sbjct 10674 TCCGAGCCGTCGAGGTCGTGCTCGACGTAC-CAGGTGC--GGACCTCCTCAGGCGACGGG 10730
Query 317032 AACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTG 317091
|| || || | ||| |||||| || || | |||||| |||||||| || | ||| ||
Sbjct 10731 AAGCCCTCGACCTGGCCGTTCTGGATGGCGCGCATCAGGGTCGACTTACCGGAACCGTTA 10790
Query 317092 GGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGA 317151
| || || ||||| || || | || ||| || | || | ||||||| |||
Sbjct 10791 CGACCACAGAGACCGTAGCGGTGGCCACGCTTGAGGCGCAGGGTGGCGGTGTTCAGCAGA 10850
Query 317152 ATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
||||| |||| || ||||| ||||||| ||| | |||||||||||||||
Sbjct 10851 ATCTTGGCACCGTAGGCCAGCGAGAACTGACAGTTACACAGGTCCTCGCC 10900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046728149050896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |