Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq4 140 3e-28 seq1 125 6e-24 seq8 105 6e-18 seq5 104 2e-17 >seq4 Length=1203127 Score = 140 bits (154), Expect = 3e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||||||| ||||| ||||||||||| || |||||| | Sbjct 406580 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 406521 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| |||||||| || || ||||| |||||||||||||| || || || || | Sbjct 406520 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 406461 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| ||||||||| | ||| | ||| ||||| |||||||| || || Sbjct 406460 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 406401 Query 118727 AAAAATCTGCATGGC 118741 || || |||||||| Sbjct 406400 GAAGATTTGCATGGC 406386 >seq1 Length=1507387 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | || ||| || ||||||||||| |||| Sbjct 1005385 TACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGC 1005326 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | ||||| |||||| ||||| || || || | || |||||||| || || |||| Sbjct 1005325 TAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAG 1005266 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| || || || || | || | ||||||| ||||| Sbjct 1005265 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1005206 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | ||| ||||| || || || || |||||||| ||||| Sbjct 1005205 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005157 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | | || ||||||||| | || ||| || ||||||||||| |||| Sbjct 1005613 TACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGC 1005554 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | ||||| |||||| ||||| || || || | || |||||||| || || |||| Sbjct 1005553 TAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAG 1005494 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| || || || || | || | ||||||| ||||| Sbjct 1005493 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1005434 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||| | ||| ||||| || || || || ||||| || ||||| Sbjct 1005433 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||| | || ||| || |||||||| || ||||| | ||||| ||| Sbjct 1005825 CAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCTAAGCGTGCGGCCATC 1005766 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || || | || |||||||| || || ||||| |||||||||||||| Sbjct 1005765 CTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 1005706 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | || | ||||||| ||||||||||| ||| | ||| Sbjct 1005705 CTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGT 1005646 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || ||||| || ||||| Sbjct 1005645 CTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613 >seq8 Length=443015 Score = 105 bits (116), Expect = 6e-18 Identities = 245/360 (68%), Gaps = 11/360 (3%) Strand=Plus/Minus Query 44942 ATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAAC 45001 ||||| || ||| |||| ||||| | || ||| | || || || ||||||||| || Sbjct 42018 ATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGAC 41959 Query 45002 TTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGTTGG-ACGCGCCCACCGTCAA 45060 |||||||| ||| || | | | | || || || | || | ||| || || Sbjct 41958 TTTGCCTGTCTC--CTGT--TCAGCCACCTGAAGAAGCGTGCGCACCCTGACACAGTGAA 41903 Query 45061 CGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGA 45120 | ||| || |||| || |||||||| ||| ||| ||||| |||| || |||| | Sbjct 41902 CCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGT 41843 Query 45121 ATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCG 45180 ||| || | || ||||||||| | ||| | |||||||||||||||| || || || Sbjct 41842 TTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCG 41783 Query 45181 TCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTA-TACT-GA-GAACCCATTCGAGTT 45237 || |||||| | | | | ||| || | |||| ||| || |||||| ||||| || Sbjct 41782 CCTGCTCGTCAACCT-CGGCAACCC--GAAGCACTACAACTCGACGAACCCCTTCGACTT 41726 Query 45238 TATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATA 45297 |||| | || || ||| | ||||||| | || ||||| ||| ||||| | ||| || Sbjct 41725 TATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 41666 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 134412 AGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACAC 134471 || || | ||| || || |||| ||||||||| || || ||||| ||||| || Sbjct 54305 AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 54246 Query 134472 ATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGC 134529 ||||| | |||| || || ||||| ||||| |||||| ||||||| | | Sbjct 54245 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 54186 Query 134530 CCAGACTCATCAACTGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCA 134589 | ||| || | | || || || || ||||| ||||| |||||||| ||| | | Sbjct 54185 TCGGAC--ATGTAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 54128 Query 134590 GAGCGACGCGCATGAGCATGTGTTGGGGTCTCTCC 134624 |||||||||||||||||||| ||||| | |||| Sbjct 54127 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCC 54093 >seq5 Length=687504 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||| | ||||| || ||| || || |||||||| ||||||| ||||| ||| Sbjct 231876 CAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATC 231935 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| || || ||| |||| || ||||| || || ||||| || ||||||||||| Sbjct 231936 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 231995 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 || || || || | |||| ||||| | ||| ||||||| ||| | ||| Sbjct 231996 CTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGT 232055 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || ||||| || || || || || | ||||||| Sbjct 232056 CTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 232090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830357701536