Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01-
09] 8 sequences; 7,732,420 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 3e-28
seq1 125 6e-24
seq8 105 6e-18
seq5 104 2e-17
>seq4
Length=1203127
Score = 140 bits (154), Expect = 3e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || ||||||||||| ||||||| ||||| ||||||||||| || |||||| |
Sbjct 406580 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 406521
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
||| |||||||| || || ||||| |||||||||||||| || || || || |
Sbjct 406520 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 406461
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| ||||||| ||||||||| | ||| | ||| ||||| |||||||| || ||
Sbjct 406460 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 406401
Query 118727 AAAAATCTGCATGGC 118741
|| || ||||||||
Sbjct 406400 GAAGATTTGCATGGC 406386
>seq1
Length=1507387
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | || ||||||||| | || ||| || ||||||||||| ||||
Sbjct 1005385 TACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGC 1005326
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| | ||||| |||||| ||||| || || || | || |||||||| || || ||||
Sbjct 1005325 TAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAG 1005266
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || || || | || | ||||||| |||||
Sbjct 1005265 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1005206
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||| | ||| ||||| || || || || |||||||| |||||
Sbjct 1005205 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005157
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | || ||||||||| | || ||| || ||||||||||| ||||
Sbjct 1005613 TACCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGC 1005554
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| | ||||| |||||| ||||| || || || | || |||||||| || || ||||
Sbjct 1005553 TAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAG 1005494
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || || || | || | ||||||| |||||
Sbjct 1005493 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1005434
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||| | ||| ||||| || || || || ||||| || |||||
Sbjct 1005433 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||||||| | || ||| || |||||||| || ||||| | ||||| |||
Sbjct 1005825 CAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCTAAGCGTGCGGCCATC 1005766
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || || || | || |||||||| || || ||||| ||||||||||||||
Sbjct 1005765 CTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 1005706
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | || | ||||||| ||||||||||| ||| | |||
Sbjct 1005705 CTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGT 1005646
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || ||||| || |||||
Sbjct 1005645 CTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613
>seq8
Length=443015
Score = 105 bits (116), Expect = 6e-18
Identities = 245/360 (68%), Gaps = 11/360 (3%)
Strand=Plus/Minus
Query 44942 ATGCCCGGACTGACGTTTAGCAACGAATTGATTTCGAGAGACGAAGGTCTGCACACCAAC 45001
||||| || ||| |||| ||||| | || ||| | || || || ||||||||| ||
Sbjct 42018 ATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAGGGCCTGCACACCGAC 41959
Query 45002 TTTGCCTGCCTCTACTATAATACGAGAGTCGATCAAAAGTTGG-ACGCGCCCACCGTCAA 45060
|||||||| ||| || | | | | || || || | || | ||| || ||
Sbjct 41958 TTTGCCTGTCTC--CTGT--TCAGCCACCTGAAGAAGCGTGCGCACCCTGACACAGTGAA 41903
Query 45061 CGACATGTTCTCCGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGA 45120
| ||| || |||| || |||||||| ||| ||| ||||| |||| || |||| |
Sbjct 41902 CCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGT 41843
Query 45121 ATCGTTGGTGGGAATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCG 45180
||| || | || ||||||||| | ||| | |||||||||||||||| || || ||
Sbjct 41842 TTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCG 41783
Query 45181 TCTTCTCGTCCAGTTAAAGTATCCCAAGATGTACTA-TACT-GA-GAACCCATTCGAGTT 45237
|| |||||| | | | | ||| || | |||| ||| || |||||| ||||| ||
Sbjct 41782 CCTGCTCGTCAACCT-CGGCAACCC--GAAGCACTACAACTCGACGAACCCCTTCGACTT 41726
Query 45238 TATGAACAATATTTCGTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATA 45297
|||| | || || ||| | ||||||| | || ||||| ||| ||||| | ||| ||
Sbjct 41725 TATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 41666
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 134412 AGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACAC 134471
|| || | ||| || || |||| ||||||||| || || ||||| ||||| ||
Sbjct 54305 AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 54246
Query 134472 ATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGC 134529
||||| | |||| || || ||||| ||||| |||||| ||||||| | |
Sbjct 54245 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 54186
Query 134530 CCAGACTCATCAACTGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCA 134589
| ||| || | | || || || || ||||| ||||| |||||||| ||| | |
Sbjct 54185 TCGGAC--ATGTAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 54128
Query 134590 GAGCGACGCGCATGAGCATGTGTTGGGGTCTCTCC 134624
|||||||||||||||||||| ||||| | ||||
Sbjct 54127 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCC 54093
>seq5
Length=687504
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||||| || ||| || || |||||||| ||||||| ||||| |||
Sbjct 231876 CAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATC 231935
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || || ||| |||| || ||||| || || ||||| || |||||||||||
Sbjct 231936 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 231995
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| ||||| | ||| ||||||| ||| | |||
Sbjct 231996 CTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGT 232055
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|| ||||| || || || || || | |||||||
Sbjct 232056 CTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 232090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830357701536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |