Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01-
09] 8 sequences; 7,732,420 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq8 136 8e-27
seq1 100 6e-16
>seq8
Length=443015
Score = 136 bits (150), Expect = 8e-27
Identities = 411/631 (65%), Gaps = 19/631 (3%)
Strand=Plus/Plus
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | ||||||| ||||| ||||| ||| || || || || || ||||||||
Sbjct 54028 TACAACTTCTTTGGCTTCAAGACGCTCGAGCGCTCCTACCTGCTGCGGATCAATGGCAAG 54087
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
| | ||| || ||||||||| | ||||| || || ||||| || ||| || |||
Sbjct 54088 GTTGCGGAGCGCCCCCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGCGAGGAC 54147
Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATG--AGTGAACGCTGGATGACACATGCCA 248995
| | ||||| | |||||||||||| | ||| | ||| || | ||||| ||
Sbjct 54148 GTGGCGAGCGCGATCGAGACGTACAACTACATGTCCGAGAAGGC--CTTTACACACGCGT 54205
Query 248996 CACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTG 249055
| ||||| || ||||| ||||| || |||| || || |||||||| ||| |
Sbjct 54206 CGCCGACCCTGTTCAATGCCGGCACGCCCAACCCCCAAATGTCGTCGTGCTTCCTTGTGA 54265
Query 249056 CCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCGAAGA 249112
||| | |||||||| |||| || || || |||||||| | |||| |||| ||
Sbjct 54266 GTATGAAGGACGACTCGATCGAGGGTATATACGACACGCTCA---AGACCTGTGCGATGA 54322
Query 249113 TTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGT 249172
| || || ||||| || ||||| | || |||||| || |||| ||| ||||
Sbjct 54323 TCAGCAAGACGGCCGGCGGTATTGGTCTGAACATCCACAACATTCGTGCGACGGGCTCGT 54382
Query 249173 ACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGT 249232
||||| || || || || || || | ||||| || ||| | || || | |
Sbjct 54383 ACATCGCCGGCACGAACGGTGTGAGCAACGGTATTGTGCCCATGCTCCGCGTGTACAACA 54442
Query 249233 CCACCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGT 249286
||| || | | | | |||||| ||| ||||| ||| | || || || |
Sbjct 54443 ACACGGCGCGCTACGTGGACCAGGGCGGCAACAAGCGCC---CGGGCGCCTTTGCGATCT 54499
Query 249287 ATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCA 249346
| |||| ||||||| | || | || || || | || || |||||| | ||||
Sbjct 54500 ACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATTGATCTGCGCAAGAACCATGGCA 54559
Query 249347 ACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGC 249406
| ||| || | ||||| ||||| ||| | |||||| | |||| |||||||||
Sbjct 54560 AGGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGC 54619
Query 249407 GCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
|||| ||| | ||||||| ||| ||||
Sbjct 54620 GCCGTGTCGAACAGAACGGCGACTGGTCGCT 54650
>seq1
Length=1507387
Score = 100 bits (110), Expect = 6e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 115402 ATCGCACATCTGCTCTGAATCGGTTCGATGATTTTGGTGGAGTTGTTGCAGACTATGATG 115461
|||||||| | |||||| ||||| || ||||| ||| | || | |||||| | | | |
Sbjct 518287 ATCGCACAGCGGCTCTGGATCGGCTCAATGATCTTGTTCGACTGGTTGCACGCAAAGCAG 518346
Query 115462 AACCGCGTCGTGCTCGAGTAAACATCCATGATCCGTCGCAGCGCCTGGAAAGCACCAGGT 115521
|| ||||||||| || ||| | ||||| | || ||||||||||| ||||| ||
Sbjct 518347 AAGCGCGTCGTGGGCGCGTAGATCTCCATCGTGCGACGCAGCGCCTGCTGCGCACCCGGC 518406
Query 115522 GTCATCGAGTCTGCCTCGTCGAGAACGACAATCTT 115556
||||| ||| ||||||||||||| || |||||
Sbjct 518407 GTCATGCTGTCCGCCTCGTCGAGAATGATGATCTT 518441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766289938944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |