Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01-
09] 8 sequences; 7,732,420 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq4 158 1e-33
seq1 152 4e-32
seq5 145 6e-30
>seq4
Length=1203127
Score = 158 bits (174), Expect = 1e-33
Identities = 158/205 (77%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
|||||| ||||||||||||||||||||||||||| |||| |||| |||| || || ||
Sbjct 406592 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTG 406533
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || ||||| |||| ||||||||||| ||||| | |||||||||||| || ||
Sbjct 406532 CTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 406473
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | ||||| ||| ||||| | ||||||||||||||| ||
Sbjct 406472 GGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGT 406413
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
||||||||| || ||||||||||||
Sbjct 406412 CAGAGTCTTGACGAAGATTTGCATG 406388
>seq1
Length=1507387
Score = 152 bits (168), Expect = 4e-32
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||||||||||||||||||||||||||||||| | || ||| | || |||
Sbjct 1005593 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCC 1005534
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || |||| ||||||||||| ||||| | ||||||||||||
Sbjct 1005533 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1005474
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | ||||| ||| ||||| | ||| |||||||||
Sbjct 1005473 ATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 1005414
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| ||||||||||||||
Sbjct 1005413 CCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385
Score = 147 bits (162), Expect = 2e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||||||||||||||||||||||||||||||| | || ||| | || |||
Sbjct 1005365 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCC 1005306
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || |||| ||||||||||| ||||| | ||||||||||||
Sbjct 1005305 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1005246
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | ||||| ||| ||||| | ||| |||||||||
Sbjct 1005245 ATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 1005186
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| ||||| ||||||||
Sbjct 1005185 CCAGTGAGGGTCTTAACAAAAATTTGCAT 1005157
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| ||||||||||||||||||||||| |||||| | || ||| | || |||
Sbjct 1005821 ACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCTAAGCGTGCGGCCATCCTCC 1005762
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || |||| ||||||||||| ||||| | ||||||||||||
Sbjct 1005761 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1005702
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | ||||| ||| ||||| | ||| |||||||||
Sbjct 1005701 ATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 1005642
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| ||||||||||||||
Sbjct 1005641 CCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613
>seq5
Length=687504
Score = 145 bits (160), Expect = 6e-30
Identities = 155/205 (76%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| ||||||||||||||||| |||||||||||| |||| |||| | || ||||| ||
Sbjct 231885 GTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTG 231944
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| |||| ||||||||||| ||||| | ||||||||||||| || ||
Sbjct 231945 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 232004
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | ||||||||| | ||| |||||||| || ||
Sbjct 232005 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 232064
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||| || || | |||||||
Sbjct 232065 AAGGGTCTTGACGAACACTTGCATG 232089
Score = 89.7 bits (98), Expect = 4e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||||||||||||||||||||| || |||||||| |||| || | || ||||||||
Sbjct 142061 GTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTG 142002
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || |||| ||||| ||||| || || | ||||||||||||
Sbjct 142001 CTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCC 141950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075161480168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |