Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq4 158 1e-33 seq1 152 4e-32 seq5 145 6e-30 >seq4 Length=1203127 Score = 158 bits (174), Expect = 1e-33 Identities = 158/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| ||||||||||||||||||||||||||| |||| |||| |||| || || || Sbjct 406592 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTG 406533 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||||||||| ||||| | |||||||||||| || || Sbjct 406532 CTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 406473 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| ||||| | ||||||||||||||| || Sbjct 406472 GGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGT 406413 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||||||||| || |||||||||||| Sbjct 406412 CAGAGTCTTGACGAAGATTTGCATG 406388 >seq1 Length=1507387 Score = 152 bits (168), Expect = 4e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||||||||||||||||||||||||||||||| | || ||| | || ||| Sbjct 1005593 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCC 1005534 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| ||||||||||| ||||| | |||||||||||| Sbjct 1005533 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1005474 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| ||| ||||| | ||| ||||||||| Sbjct 1005473 ATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 1005414 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||||||||| Sbjct 1005413 CCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||||||||||||||||||||||||||||||| | || ||| | || ||| Sbjct 1005365 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCC 1005306 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| ||||||||||| ||||| | |||||||||||| Sbjct 1005305 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1005246 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| ||| ||||| | ||| ||||||||| Sbjct 1005245 ATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 1005186 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| ||||| |||||||| Sbjct 1005185 CCAGTGAGGGTCTTAACAAAAATTTGCAT 1005157 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| ||||||||||||||||||||||| |||||| | || ||| | || ||| Sbjct 1005821 ACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCTAAGCGTGCGGCCATCCTCC 1005762 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| ||||||||||| ||||| | |||||||||||| Sbjct 1005761 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1005702 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| ||| ||||| | ||| ||||||||| Sbjct 1005701 ATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 1005642 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||||||||| Sbjct 1005641 CCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613 >seq5 Length=687504 Score = 145 bits (160), Expect = 6e-30 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||| |||||||||||| |||| |||| | || ||||| || Sbjct 231885 GTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTG 231944 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||||||||| ||||| | ||||||||||||| || || Sbjct 231945 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 232004 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| |||||||| || || Sbjct 232005 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 232064 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || || | ||||||| Sbjct 232065 AAGGGTCTTGACGAACACTTGCATG 232089 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||||||||||||||| || |||||||| |||| || | || |||||||| Sbjct 142061 GTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTG 142002 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||| ||||| ||||| || || | |||||||||||| Sbjct 142001 CTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCC 141950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075161480168