Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 134 1e-26 seq1 102 8e-17 >seq8 Length=443015 Score = 134 bits (148), Expect = 1e-26 Identities = 164/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| || | |||||| | || ||||| || ||||| || || || || || | ||| Sbjct 41889 GAGGCTGTGGCCATTGAGCAGGACTTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGC 41830 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 ||||||||| | | |||||| ||||||| |||||||| |||||| | ||| | | | Sbjct 41829 ATGAACGCGCGCCTCATGTGCCAGTACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAAC 41770 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||||| |||| || || |||||||| |||||| | ||||| ||| Sbjct 41769 CTCGGCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCG 41710 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060 ||| ||||||| | |||||||||||| | || || | ||| || Sbjct 41709 CTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 41666 >seq1 Length=1507387 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | ||||| || ||||| | ||| ||| || ||||||||||| ||| Sbjct 1005842 TGGCCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCG 1005783 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || | |||| || || ||||| || || ||| | |||||||| || || || ||| Sbjct 1005782 CTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGA 1005723 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| ||| || || | | || | ||||| | | ||| Sbjct 1005722 GGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCG 1005663 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | ||| | ||||||||| || | || || || || ||||||||| Sbjct 1005662 ACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCATA 1005612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063950393600