Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 seq5 84.2 2e-11 >seq1 Length=1507387 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575 ||| || || || ||||||||||| ||||||||||| || || || || || | |||| Sbjct 1005366 CACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCGGCCATCCT 1005308 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 |||||||||| ||| | |||| | |||||| || ||| || | | ||||||||| Sbjct 1005307 CCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCT 1005248 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 || || ||||| | | || || || | ||||| ||||| || || || | Sbjct 1005247 GGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCT 1005188 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 | || ||||| || || |||||||| ||||| ||| Sbjct 1005187 TGCCAGTGAGGGTCTTAACAAAAATTTGCATTGTG 1005153 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575 ||| || || || ||||||||||| ||||||||||| || || || || || | |||| Sbjct 1005594 CACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GCTAAGCGTGCGGCCATCCT 1005536 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 |||||||||| ||| | |||| | |||||| || ||| || | | ||||||||| Sbjct 1005535 CCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCT 1005476 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 || || ||||| | | || || || | ||||| ||||| || || || | Sbjct 1005475 GGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCT 1005416 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || ||||| || || ||||| || ||||| Sbjct 1005415 TGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575 ||| || || || ||||||||||| |||||||| || || || || || || | |||| Sbjct 1005822 CACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTC-GCTAAGCGTGCGGCCATCCT 1005764 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 |||||||||| ||| | |||| | |||||| || ||| || | | ||||||||| Sbjct 1005763 CCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCT 1005704 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 || || ||||| | | || || || | ||||| ||||| || || || | Sbjct 1005703 GGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCT 1005644 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | || ||||| || || ||||| || ||||| Sbjct 1005643 TGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613 >seq5 Length=687504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 || || ||||||||||| || |||||||| || || | || || | ||||||||||| Sbjct 231886 TGGAGCGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTGCGACCATCCTCCAGCTG 231944 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || | || | ||||| || ||| || | || ||||||||| || || Sbjct 231945 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 232004 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | | || || |||| ||||||| ||||| || || || || ||||| Sbjct 232005 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 232064 Query 48703 GAGAGTTTTCACAAAAATCTGCATCGTGTCT--TGATCGAAGAAAGAGTGATGT 48754 || || || || || | ||||| || || | | | || |||| ||| ||| Sbjct 232065 AAGGGTCTTGACGAACACTTGCATGGTAACTGCTAACCAAACAAAGTGTGGTGT 232118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251158928008