Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 147 2e-30 seq4 136 4e-27 seq1 125 7e-24 seq5 113 4e-20 >seq8 Length=443015 Score = 147 bits (162), Expect = 2e-30 Identities = 298/441 (68%), Gaps = 21/441 (5%) Strand=Plus/Minus Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207 || || ||| |||||||||| |||| ||||||||| ||||| | || || | | Sbjct 42093 GCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTC 42034 Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267 || | || | ||||| || || |||| |||||||| |||||| | || || Sbjct 42033 AAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGATGAG 41974 Query 47268 GGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGTCGATCAAAAGTTGGA 47326 |||||||||||| |||||||||||||| | || | || || | ||| Sbjct 41973 GGCCTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGA-------AGAAG----- 41926 Query 47327 CGTGCCCACCGT----CAGCGA----CATGTTTGCCGAAGCCGTCGCCATTGAGATGGAG 47378 ||||| |||| | ||| || ||| | |||| || || ||||||||| ||| Sbjct 41925 CGTGCGCACCCTGACACAGTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGAC 41866 Query 47379 TTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAG 47438 ||||| | || || |||| | || | | || ||||||||| | ||| | || Sbjct 41865 TTTTTGACTGACGCCTTGCCTGTTTCGCTGATCGGCATGAACGCGCGCCTCATGTGCCAG 41806 Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCAC 47498 ||||| || ||||| || |||||||||||||| | || | || ||| ||| || Sbjct 41805 TACATTGAGTTTGTGGCGGACCGCCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAAC 41746 Query 47499 ACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTC 47558 | ||| || ||||| |||||| | ||||| |||||| |||||||| | ||||||||| Sbjct 41745 TCGACGAACCCCTTCGACTTTATGGAGAACATCTCGCTCCAGGGCAAGTCGAACTTTTTC 41686 Query 47559 GAGAAGCGCGTCGGCGAATAT 47579 ||| ||||| | ||| ||| Sbjct 41685 GAGCGCCGCGTTGCCGACTAT 41665 Score = 116 bits (128), Expect = 4e-21 Identities = 943/1491 (63%), Gaps = 96/1491 (6%) Strand=Plus/Minus Query 146060 ACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGA 146119 || ||||||||||||| ||||| ||||| || || || | || || | |||||| ||| Sbjct 55528 ACGGGTTGACCACCTGGAACTCACCGGCAAGCACACGGCGCATGTAAATGTTGCTCGTGT 55469 Query 146120 ACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACG 146179 ||||||| || |||||||| || || ||||| ||| | || || |||||| || Sbjct 55468 ACGGCTCAAAGCACTCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCG 55409 Query 146180 CCACCAGCAAAGAGTTTCTCACGCCGTGTCTTTG-AATCTTTTCCCGTAGTTTGGACCAA 146238 ||| ||||| ||||| | || ||||| || | ||||||| || || || ||| Sbjct 55408 CCATCAGCAGCGAGTTGCGCAGACCGTG-CTGGGCAATCTTTGCCTTGAGCGAGGCCCAG 55350 Query 146239 TTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCC--GCGGA 146296 | ||||| | |||| || | || | ||||||| |||| ||| ||| Sbjct 55349 TCCCACA---GGTCCGACGGCGTGCGGTTCCACATGTCGTACTGCAGGAGGCCCTGCGAG 55293 Query 146297 ACAGGGGGCTATTCTCGTACGATTCATAAGGACCGTCGATCTTG--GCCAGTTCGCAGCT 146354 ||||| || |||||||| || || | || | || | ||||| |||||||| Sbjct 55292 GCAGGG--CTGCCCTCGTACGTCTCGTATGTGCCAT--ATTCGGCCGCCAGCTCGCAGCT 55237 Query 146355 AGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATC-----ATGTAGTTGACGCTCCTG 146409 |||| |||| | ||| |||||||| |||| || || | ||| Sbjct 55236 GCGCTCCAAGGCCGCATGGTAAATGGTCTCAAAGATCTGCACATTCAGCAGGCGC----- 55182 Query 146410 GCCTCCTCGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTAT 146468 ||||||| ||||||| | || ||| | | | || || || ||||| || ||||| | Sbjct 55181 GCCTCCTGGCTGTCGAACGG-ATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGAC 55123 Query 146469 CCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAGCGCCCGC---AGTGGGATA 146525 |||| ||| | ||||||||| | |||| | || | || | | | ||| || Sbjct 55122 ACCGATACCGATGGGGCGGTGCCGCATGTTCGAG--CGACGTGCACTCTCCACAGGG-TA 55066 Query 146526 GTGGTTGCTGTCGATGATCTTGTTGAGATTAC-GCACGACAATTTTCGTCAAACGATTCA 146584 || |||| | |||||||| ||| || || |||| || | ||||| || || | Sbjct 55065 GTAGTTGATATCGATGATGCGGTTCAGGTTCTTGCAC-ACCACTTTCGACA--CG-TCGT 55010 Query 146585 GCAGGACAT---AGTCAAATGTTTTAGTTTTAACGTTGACG-CACTT---GTTGACGGCG 146637 ||||| | ||| |||| || | | || || | || | || | | ||| Sbjct 55009 GCAGGCGTTGGAAGTTGTATGTCTTCGAGGCACCGGTGCCCTCAATAAACGTCGGCAGCG 54950 Query 146638 --ATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGG 146695 || || |||| ||| || || || ||||||||| || |||| | |||||| | Sbjct 54949 CAATCGACGCCAGGTTGCACACAGCTGTCTCGTCCGGCGAGCTGTACTCGATAATCTCCG 54890 Query 146696 CGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTG---TTGC 146752 ||||||||| || |||||| |||||| || || |||||||| |||| || Sbjct 54889 TGCAGAGGTTCGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTACT---CTTGCGGTTCG 54833 Query 146753 AGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTCGACGATGAATC 146812 | ||||||||| || | | || || || || | | | ||||| ||| | | Sbjct 54832 CCGAGTCCTTGTACAGGACAAAAGGATTGCCCGTCTCAATTTGCGCCTCGAGGAT--AGC 54775 Query 146813 TAAACAAATCT-CTG-GCCTTTACTTGTCTTTCGTACAGTTTATTCTTTTCGTATTTCTC 146870 | || | || ||| ||||| || | | | | | ||||| ||||| Sbjct 54774 GTACCACAGCTTCTGCGCCTTGACAGAGCGCTTGGCGCGGCCCTCGCGCTCGTACTTCTC 54715 Query 146871 GTACAATATTTCAAAA--CTAGAACCGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGA 146928 ||||| ||||| || | || || ||| || || || ||| ||| Sbjct 54714 GTACAGAGCATCAAACTCCTCG--CCATAGCAGTCAGCCAGACCTGGGCACTCGGCGGGG 54657 Query 146929 CAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCGGGAATCCAA 146988 || | ||||||||| || |||| | || || ||| |||| |||||||||||| Sbjct 54656 CACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATGAACAGATCGGGAATCCAC 54597 Query 146989 AGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTG 147048 || |||| | || |||||| || | ||||| ||| ||| | | | || | Sbjct 54596 AGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCC-ATGGTTCTTGCGCAGATC 54538 Query 147049 AGGACAT-CGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCG 147107 | | || | ||| |||| ||||| ||||||| ||| || | ||||| || Sbjct 54537 AATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATCGCAAAGGCGCCCGGGCG 54478 Query 147108 CTTA---CCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAACATGGACAC 147164 ||| |||||||| || |||| |||| || |||| ||| | || || | ||||| ||| Sbjct 54477 CTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTACACGCGGAGCATGGGCAC 54418 Query 147165 GAGGCCG---------CCGGATTTTGTGGTGCCGTTGTATTGAGCGCTGACGC------- 147208 | ||| ||| || ||| | || |||| |||| | | ||| Sbjct 54417 AATACCGTTGCTCACACCG---TTCGTGCCGGCGATGTAC-GAGCCC-GTCGCACGAATG 54363 Query 147209 -TTTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGC---GGACTCGTGC 147264 | || | | |||| || | ||| ||| || || |||| || || || | || Sbjct 54362 TTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCACAGGTCTTGAGC 54303 Query 147265 AAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAACAC 147324 || | ||| || || ||||| ||| ||||| || | ||||| ||||| || Sbjct 54302 ---GTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 54246 Query 147325 ATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGTGAACG--TGC 147382 |||||||| |||||| || ||||| || || ||||| || || | | | Sbjct 54245 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 54186 Query 147383 CCAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATGGCCA 147442 | ||| | | ||| ||||| || || |||||| ||||| |||||||| ||| | | Sbjct 54185 TCGGACATGT-AGTTG-TACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 54128 Query 147443 GGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGA 147493 ||||||||||||||||||||||||||| || ||||||| | | |||||| Sbjct 54127 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGA 54077 >seq4 Length=1203127 Score = 136 bits (150), Expect = 4e-27 Identities = 147/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || ||||| ||||| |||| || ||||||| || || ||||| || |||||| | Sbjct 406580 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 406521 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||| || || ||||| ||||||||||||||| ||| || ||||| | Sbjct 406520 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 406461 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| |||||| || | ||| | ||| ||||| |||||||| || || Sbjct 406460 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 406401 Query 127102 AAAAATCTGCATGGC 127116 || || |||||||| Sbjct 406400 GAAGATTTGCATGGC 406386 >seq1 Length=1507387 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||||| || | ||| ||| || ||||| ||||| |||| Sbjct 1005383 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005324 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || | |||| ||||| || || ||||| Sbjct 1005323 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1005264 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | || | ||||||| |||||| Sbjct 1005263 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACC 1005204 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | ||| ||||| || || || || |||||||| ||||| Sbjct 1005203 TCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005157 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||||| || | ||| ||| || ||||| ||||| |||| Sbjct 1005611 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005552 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || | |||| ||||| || || ||||| Sbjct 1005551 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1005492 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||||| | || | ||||||| |||||| Sbjct 1005491 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACC 1005432 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | ||| ||||| || || || || ||||| || ||||| Sbjct 1005431 TCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385 Score = 122 bits (134), Expect = 8e-23 Identities = 170/237 (72%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 126877 CTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATT 126936 || ||||| ||||| || | |||| |||||| |||| ||| ||| || ||||| || Sbjct 1005848 CTTTACTGG-CCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTT 1005790 Query 126937 GTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTG 126996 || |||| | |||||| ||| || ||||| || || || | |||| ||||| || Sbjct 1005789 ATAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTG 1005730 Query 126997 ATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGT 127056 || ||||| ||||||||||||||| ||| || ||||| | || | ||||||| Sbjct 1005729 GTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGA 1005670 Query 127057 ACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||| |||| ||| | ||| ||||| || || || || ||||| || ||||| Sbjct 1005669 CGACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613 >seq5 Length=687504 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | |||| ||| | || | ||| ||| || || || ||||| ||| Sbjct 231859 GCACCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCG 231918 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || ||||||| ||| || ||||| || || ||| |||||| ||||| || || ||| Sbjct 231919 CTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGA 231978 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||| | | |||| ||||| | | ||| Sbjct 231979 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCC 232038 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 || |||| ||| | ||| || ||||| || || || || || | ||||||| Sbjct 232039 ACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 232090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500752449920