Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq8 410 1e-109 seq1 150 2e-31 seq5 122 9e-23 seq4 107 2e-18 >seq8 Length=443015 Score = 410 bits (454), Expect = 1e-109 Identities = 593/827 (72%), Gaps = 25/827 (3%) Strand=Plus/Plus Query 132627 CTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGC 132686 ||| ||||| || | || |||| | || ||| | |||||| || |||||||| | Sbjct 41683 CTCGAAAAAGTTCGACTTGCCCTGGAGCGAGATGTTCTCCATAAAGTCGAAGGGGTTCGT 41742 Query 132687 TGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 | |||||||||||| | |||||| ||| ||||||||| | ||| ||||| ||||| Sbjct 41743 CGAGTTGTAGTGCTTCGGGTTGCCGA---GGTTGACGAGCAGGCGGTCCGCCACAAACTC 41799 Query 132744 GATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGG 132802 ||||| || ||||| | ||| | | | || | ||| || |||| || || | Sbjct 41800 AATGTACTGGCACATGAGGCGCGCGTTCATG-CCGATCAGCGAAACAGGCAAGGCGTCAG 41858 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGAT----TTCCCTAACGCGCGCC 132858 | | |||| ||||| ||||| || || ||||||| ||| ||| || | | Sbjct 41859 TCAAAAAGTCCTGCTCAATGGCCACAGCCTCGGTGATGATGCGGTTCACTGTGTCAGGGT 41918 Query 132859 GCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 |||| || || || || |||||| | || ||||||||| |||| |||| Sbjct 41919 GCGCACGCTTCTT----CAGGTGGCTGAACAGGAGACAGGCAAAGTCGGTGTGCAGGCCC 41974 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 || || | || ||||| ||||| ||| | || || |||||||||||||| || ||| Sbjct 41975 TCATCGCGCGAGATGAGCTCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCTTG 42034 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||| || |||| ||| || |||||| || |||| |||||||||||| || || ||| Sbjct 42035 AGCCAGAAGATGGAGGCAAACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGCC 42094 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 || |||||||| ||||| ||| || | |||||||||||| ||||| |||||| Sbjct 42095 ACAAGGCGCTCCGAGAACGAGGCGCGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCC 42154 Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCA--ACAAACGGAGTTTCTCTTCCG 133156 || | |||||| || ||||| ||||| ||||| | | |||| | || |||| Sbjct 42155 TTCTGCTTGACGACGGGGATCGTCTCGATAGCGTTGAAGAGAAACTCA--CGCTGCTCCG 42212 Query 133157 AGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGG 133216 || | ||| |||||||||||| ||| ||| | |||||||| | ||||||||| Sbjct 42213 GCTCGCGGATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCA 42272 Query 133217 CGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGC 133275 ||| || |||||||| ||||| || |||||| | ||||||| || | || ||| ||| Sbjct 42273 TGATCTGGAAGCCGTAGAAGCAGCGGGCCTCGGCGGCCTGCACCTC-GGCGCTGAAGCGC 42331 Query 133276 TCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTG 133335 |||||||| || ||||||||||| ||||| || || || |||||||| ||||| | Sbjct 42332 TCGACCAGGTTCTCGTTGACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGCTC 42391 Query 133336 ATGAAATGGCGCTCGTTGTCGTTCAAGC---GCTCCCAGTCGCGCGTGTCCTTGGACAGG 133392 | || |||||||| |||||||||| || | ||||||||| || |||||| || ||| Sbjct 42392 ACAAAGTGGCGCTCATTGTCGTTCATGCGGTGGTCCCAGTCGTGCAAGTCCTTCGAGAGG 42451 Query 133393 TCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||| ||||||| ||||||| ||||| |||||||| || |||||||| Sbjct 42452 TCCATCTCCTCGGCGGTCCAGAACGAGGCCTCGGCCTTCTTGTACAT 42498 >seq1 Length=1507387 Score = 150 bits (166), Expect = 2e-31 Identities = 168/219 (77%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || ||||| ||||| || |||||| |||| |||||| | | Sbjct 1005156 AATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTC 1005215 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || || | | || | || |||| ||||| ||||| ||||| | |||| Sbjct 1005216 GGACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 1005274 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || |||| || ||||| |||||||| || | ||||| || | |||||||| Sbjct 1005275 AACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACA 1005334 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 |||| || ||||| ||| |||||||| |||||||||||| Sbjct 1005335 ACATTCAGAAGGAGAGC-ACGCTGCACTTGGTGCTGCGT 1005372 Score = 149 bits (164), Expect = 6e-31 Identities = 167/218 (77%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| ||||| || |||||| |||| |||||| | | Sbjct 1005385 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005444 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 1005445 GACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1005503 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || |||| || ||||| |||||||| || | ||||| || | ||||||||| Sbjct 1005504 ACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAA 1005563 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| ||| |||||||| |||||||||||| Sbjct 1005564 CATTCAGAAGGAGAGC-ACGCTGCACTTGGTGCTGCGT 1005600 Score = 141 bits (156), Expect = 9e-29 Identities = 173/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| ||||| || |||||| |||| |||||| | | Sbjct 1005613 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005672 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | || | || |||| ||||| ||||| ||||| | ||||| Sbjct 1005673 GACACGATTGACAATG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1005731 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || |||| || ||||| |||||||| || | ||||| || | |||||| || Sbjct 1005732 ACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTATAA 1005791 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||| || ||||| ||| ||||| || |||||||||||| | | || |||| Sbjct 1005792 CATTCAGAAGGAGAGC-ACGCTACACTTGGTGCTGCGTCTCCGTGGTGGCC 1005841 >seq5 Length=687504 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||| | ||||| || || || || || || || |||||| |||| || ||| | || Sbjct 232088 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 232029 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || || | |||||| Sbjct 232028 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231969 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| |||||||| || | ||||| || | |||||||||| Sbjct 231968 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231909 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| ||| ||||| || | |||||||| Sbjct 231908 ATCCAGAAGGAGAGC-ACGCTCCACCTTGTGCTGCG 231874 >seq4 Length=1203127 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| || || ||| | || |||||| | | Sbjct 406389 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 406448 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| ||||| || || | |||||| Sbjct 406449 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 406508 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||||| || |||| ||||| || | |||||||||| Sbjct 406509 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 406568 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| ||| || ||||| | ||||| || Sbjct 406569 ATTCAGAAGGAGAGC-ACCCTGCACCTTGTGCTTCG 406603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172749982720