Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq8 172 7e-38 >seq8 Length=443015 Score = 172 bits (190), Expect = 7e-38 Identities = 607/930 (65%), Gaps = 21/930 (2%) Strand=Plus/Plus Query 75148 CTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATGGA 75207 |||||| |||| || || ||| ||| || | ||| || |||||| | ||| Sbjct 54036 CTTTGGCTTCAAGACGCTCGAGCGCTCCTACCTGCTGCGGATCAATGGCAAGGTTGCGGA 54095 Query 75208 AACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTC 75267 ||| ||| ||||| ||||||| ||||| ||||||||||||| || ||| | | Sbjct 54096 GCGCCCCCAGCACATGCTCATGCGCGTCGCCGTCGGCATCCACGGCGAGGACGTGGCGAG 54155 Query 75268 TGTCTTGGAGACATACGACAAGATGTCCCA--AGGTATGTTCATTCACGCAACACCAACC 75325 | | ||||| ||| || | |||||| | ||| | | || ||||| | || ||| Sbjct 54156 CGCGATCGAGACGTACAACTACATGTCCGAGAAGGCCTTTACA--CACGCGTCGCCGACC 54213 Query 75326 CTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAG 75385 || |||||||| || || || | || || ||||| ||||||||| | | ||| Sbjct 54214 CTGTTCAATGCCGGCACGCCCAACCCCCAAATGTCGTCGTGCTTCCTTGTGAGTATGAAG 54273 Query 75386 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 75445 || ||||| ||| | ||||| || | || || | | |||||| ||| ||| | Sbjct 54274 GACGACTCGATCGAGGGTATATACGACACGCTCAAGACCTGTGCGATGATCAGCAAGACG 54333 Query 75446 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGG 75504 || || |||||||| || ||||||| | | | || | |||||| ||| | Sbjct 54334 GCCGGCGGTATTGGTCTGAACATCCACAACATTCGTGCGACGGG--CTCGTACATCGCCG 54391 Query 75505 G-ACAAATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 | || || ||| | || | |||||| | || ||||| ||||| | ||| ||| ||| Sbjct 54392 GCACGAACGGTGTGAGCA-ACGGTATTGTGCCCATGCTCCGCGTGTACAACAACACGGCG 54450 Query 75563 CGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618 ||||| || | || | | ||| | || ||| || | ||| ||||| |||| || Sbjct 54451 CGCTACGTGGACCAGG-GCGGCAACAAGCGCCCGGGCGCCTTTGCGATCTACCTGGAGCC 54509 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 ||||| | || | | || || |||| | || ||||| || | || || | Sbjct 54510 GTGGCACTCGGACGTTTTTGAATTTATTGATCTGCGCAAGAACCATGGCAAGGAGGAAGT 54569 Query 75679 TCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGA 75738 || | || || || | ||||||||||| || || |||||| || || || Sbjct 54570 GCGCGCGCGCGACCTGTTCCTGGCGCTGTGGATTCCCGATCTGTTCATGCGCCGTGTCGA 54629 Query 75739 GGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGG 75797 || || | ||||| || | || || | | || |||||||| | ||| || Sbjct 54630 ACAGAACGGCGACTGGTCGCTGATGTGCCCCGCCGAGTGCCCAGGTCTGGCTGACTGCTA 54689 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857 ||| ||||||||||| || || ||| ||||| || ||||| | ||||| ||| Sbjct 54690 TGGC-GAGGAGTTTGATGCTCTGTACGAGAAGTACGAGCGCGAGGGCCGCGCCAA-GCGC 54747 Query 75858 -CTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAAC 75915 |||| | || ||| || | | ||| | ||||| ||| | | || | ||||| || | Sbjct 54748 TCTGT-CAAGGCGCAGAAGCTGTGGTACGCTATCCTCGAGGCGCAAATTGAGACGGGCAA 54806 Query 75916 ACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAAC 75975 || | | | || |||||||| | ||| ||||||||||| ||||| |||| || Sbjct 54807 TCCTTTTGTCCTGTACAAGGACTCGGCGAACCGCAAGAGTAACCAGAAGAACCTGGGCAC 54866 Query 75976 AATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGC 76035 ||||||||||| || || |||||||| ||| | ||||||| ||| ||||| || Sbjct 54867 GATCAAGAGCTCGAACCTCTGCACGGAGATTATCGAGTACAGCTCGCCGGACGAGACAGC 54926 Query 76036 TGTTTGCAATTTGGCATCAATCGCCCTTCC 76065 ||| ||||| |||| || || || || || Sbjct 54927 TGTGTGCAACCTGGCGTCGATTGCGCTGCC 54956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569540343040