Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01-
09] 8 sequences; 7,732,420 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 7e-30
seq4 122 8e-23
seq5 116 3e-21
>seq1
Length=1507387
Score = 145 bits (160), Expect = 7e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || |||||| || | ||| |||||||| ||||||||||| ||| |
Sbjct 1005383 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG-CT 1005325
Query 35570 AAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
||| || || | || ||||||||||| || ||||| |||| ||||| ||||||| |||
Sbjct 1005324 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGG 1005265
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
|| || |||||||||| |||||| ||| | | | | | |||||| ||| || ||
Sbjct 1005264 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1005205
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
||| | |||||||| || || || | || || ||||| || |||||| ||
Sbjct 1005204 CTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCATTGTG 1005153
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || |||||| || | ||| |||||||| ||||||||||| ||| |
Sbjct 1005611 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG-CT 1005553
Query 35570 AAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
||| || || | || ||||||||||| || ||||| |||| ||||| ||||||| |||
Sbjct 1005552 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGG 1005493
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
|| || |||||||||| |||||| ||| | | | | | |||||| ||| || ||
Sbjct 1005492 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1005433
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| | |||||||| || || || | || || ||||| || |||||
Sbjct 1005432 CTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385
Score = 143 bits (158), Expect = 2e-29
Identities = 177/238 (74%), Gaps = 3/238 (1%)
Strand=Plus/Minus
Query 35501 TCTTTATTT-CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTT 35559
|||||| | |||||||| | | || |||||| |||| ||| |||||||| ||||||||
Sbjct 1005849 TCTTTACTGGCCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTT 1005790
Query 35560 GTAATCGGCCAAG-GTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCT 35618
|| ||| | ||| || || | || ||||||||||| || ||||| |||| ||||| |
Sbjct 1005789 ATAGTCG-CTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTT 1005731
Query 35619 GGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGC 35678
|||||| ||||| || |||||||||| |||||| ||| | | | | | ||||||
Sbjct 1005730 GGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCG 1005671
Query 35679 TCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| || ||||| | |||||||| || || || | || || ||||| || |||||
Sbjct 1005670 ACGACTCGACCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613
>seq4
Length=1203127
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| ||||||||||| ||| || || || |||| || |||||||||||
Sbjct 406585 GTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCA 406526
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659
|| || |||| ||||| ||||||| ||| | || |||||||||| |||||| |||
Sbjct 406525 GCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 406466
Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719
| | | | | |||||| ||| || ||||| | || ||||| || || |||| |||
Sbjct 406465 ACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTC 406406
Query 35720 TTCACAAATATCTGCAT 35736
|| || || || |||||
Sbjct 406405 TTGACGAAGATTTGCAT 406389
>seq5
Length=687504
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | || ||| | || | ||| |||||||| || |||||||| ||| |
Sbjct 231862 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 231921
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || ||||||||||| || || || |||| ||||| ||||||| |||
Sbjct 231922 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 231981
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | |||||||||| |||||| ||||| | | | | ||||||| || ||||||
Sbjct 231982 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 232041
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | |||||||| || || || | || || || || | |||||
Sbjct 232042 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 232088
Score = 93.3 bits (102), Expect = 4e-14
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598
||| |||||||| || || ||||| || || ||| || | || ||||| ||||| ||
Sbjct 142055 CGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTGCTTGCC 141996
Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652
|||||| |||| ||||||||||||| |||| || |||||||||| ||||||
Sbjct 141995 CGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGGATCTT 141942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793554920640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |