Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8 316 2e-81 seq3 172 6e-38 >seq8 Length=443015 Score = 316 bits (350), Expect = 2e-81 Identities = 533/764 (70%), Gaps = 8/764 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252 |||||||||||||| | || |||||||| || ||| || | | ||||||||| Sbjct 54113 TCATGCGCGTCGCCGTCGGCATCCACGGCGAGGACGTGGCGAGCGCGATCGAGACGTACA 54172 Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312 ||| ||| | | ||| |||||| ||||| |||| ||||||||||| || || ||| Sbjct 54173 ACTACATGTCCGAGAAGGCCTTTACACACGCGTCGCCGACCCTGTTCAATGCCGGCACGC 54232 Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372 |||| || |||||| |||||||| ||| |||||||| ||||||||||| || | Sbjct 54233 CCAACCCCCAAATGTCGTCGTGCTTCCTTGTGAGTATGAAGGACGACTCGATCGAGGGTA 54292 Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432 | ||||| ||||||||| ||||| ||| |||| | | || ||||| ||| | Sbjct 54293 TATACGACACGCTCAAGACCTGTGCGATGATCAGCAAGACGGCCGGCGGTATTGGTCTGA 54352 Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492 || | ||| | ||||||| ||| | ||| || |||||||| || | | | Sbjct 54353 ACATCCACAACATTCGTGCGACGGGCTCGTACATCGCCGGCACGAACGGTGTGAGCAACG 54412 Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552 | || ||||| ||||||||||| | |||||||||||| || ||||| ||||||| || Sbjct 54413 GTATTGTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCA 54472 Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612 |||||| ||| | || || |||||||| |||||||||||| | ||| || | || | Sbjct 54473 ACAAGCGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGGACGTTTTTGAAT 54532 Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672 || | || ||||| ||| || || | || || ||||| || |||||||| | Sbjct 54533 TTATTGATCTGCGCAAGAACCATGGCAAGGAGGAAGTGCGCGCGCGCGACCTGTTCCTGG 54592 Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732 | ||||||||||| || || ||||||| || || || ||| || |||| |||| Sbjct 54593 CGCTGTGGATTCCCGATCTGTTCATGCGCCGTGTCGAACAGAACGGCGACTGGTCGCTGA 54652 Query 53733 TGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGGTGAGGAGTTTAACGAGATG 53791 ||||||| ||||||||| || || | | || ||| || ||||||||| | | || Sbjct 54653 TGTGCCCCGCCGAGTGCCCAGGTCTGGCTGACTG-CTATGGCGAGGAGTTTGATGCTCTG 54711 Query 53792 TATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATG 53850 || || ||||| || | |||||||| |||| |||||||||| || | || Sbjct 54712 TACGAGAAGTACG-AGCGCGAGGGCCGCGCCAAGCGCTCTGTCAAGGCGCAGAAGCTGTG 54770 Query 53851 GGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGC--TACAAGGAT 53908 | | || |||||| || || | |||||||| | || | ||| | |||||||| Sbjct 54771 GTACGCTATCCTCGAGGCGCAAATTGAGACGGGCAATCCTT--TTGTCCTGTACAAGGAC 54828 Query 53909 TCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 |||| ||| ||||| |||||||||||| | ||| ||||| Sbjct 54829 TCGGCGAACCGCAAGAGTAACCAGAAGAACCTGGGCACGATCAA 54872 Score = 132 bits (146), Expect = 5e-26 Identities = 323/485 (67%), Gaps = 12/485 (2%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || ||||| ||||| || |||||||| || || |||||||| | ||| ||||||| Sbjct 41993 TCGTTCGAGAACGACAGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCA 42052 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 || || || ||| |||||||| ||||| |||||||| |||||||| | || |||| Sbjct 42053 AACGAGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTCCGAGAAC 42112 Query 74910 GGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965 | || || ||| ||||| | | ||||| || || || | ||||| | || Sbjct 42113 GAGGCG-CGCCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGACGACGGG 42171 Query 74966 GACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTC 75025 || || ||||| || | |||||| | || || || || || | | |||| Sbjct 42172 GATCGTCTCGATAGCGTTGAAGAGAAACTCACGCTGCTCCGGCTCGCGGATGTACGTGTC 42231 Query 75026 AATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAA 75085 || | || |||||||||||||| || || ||| | | |||| | ||||||| Sbjct 42232 GATGAGGAGCGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAA 42291 Query 75086 AGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCATGTCGATATTCTCCATG 75143 | || ||||| || ||| || || | |||| || | | | ||||| || Sbjct 42292 GCAGCGGGCCTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTC--GACCAGGTTCTCGTTG 42349 Query 75144 ACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCA--- 75200 ||||| |||||||| || || || || ||||| || | | ||||||||||||| Sbjct 42350 ACGATACCGTCCGAAGCAGCAAAGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTG 42409 Query 75201 TCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTC 75260 |||| || | | |||||| || | || |||| || | || ||||||||| | ||| Sbjct 42410 TCGTTCATGCGGTGGTCCCAGTCGTGCAAGTCCTTCGAGAGGTCCATCTCCTCGGCGGTC 42469 Query 75261 CAGAA 75265 ||||| Sbjct 42470 CAGAA 42474 Score = 100 bits (110), Expect = 3e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 || || |||||||| ||||| ||||||| ||||| || || || ||| ||||||| | Sbjct 55384 GGTCTGCGCAACTCGCTGCTGATGGCGCCCATGCCGACGGCCTCCACGAGTCAGATCCTT 55443 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCA 55597 ||| ||||||| || ||||||||||||| |||||| ||| ||||||| || || Sbjct 55444 GGCTTCAACGAGTGCTTTGAGCCGTACACGAGCAACATTTACATGCGCCGTGTGCTTGCC 55503 Query 55598 GGTGAGTT 55605 |||||||| Sbjct 55504 GGTGAGTT 55511 >seq3 Length=1355867 Score = 172 bits (190), Expect = 6e-38 Identities = 247/346 (71%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828 ||||| || || ||||||||||||||| || |||| ||| |||||||||||||||||| Sbjct 276457 GTTGATGATCAGGCCCTTGATGTGCGAGCCATCAAAGTCCTGGTCGGTCATGATCATCAG 276516 Query 152829 ACGACCGTAGCGCAGGTCA--CGTAGTGACCCGTAGACCTTTCCATGTTGAAGCCCGAGG 152886 || ||||| |||||| || | | || |||||||||| || || || || |||||| Sbjct 276517 ACTGCCGTACCGCAGGCCATCCACACTG--TCGTAGACCTTGCCGTGCTGCAGGCCGAGG 276574 Query 152887 ATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCGA 152946 |||| |||| || | || | || | | | ||| | || || ||||| Sbjct 276575 ATCTCCTTGATGTGCTTGATCTCGGCGTTCTTCATGATCTGGTCGTGCGATGCCTCCCGC 276634 Query 152947 ACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGGCCTACAACGCTC 153006 || ||| || |||| || || || || ||||||||| |||||| |||||| || |||| Sbjct 276635 ACGTTGAGCAGCTTGCCGCGCAGCGGGAACACGCCGTACGCGTCGCGGCCGACCTCGCTG 276694 Query 153007 AGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAGTCG 153066 | || | | || || || || |||||||| |||||||||| || ||||| || ||| Sbjct 276695 ATGCCCGACACGGCGAGCGCCTTGGCCGAGTCGCCCTCGGTGAGGATCAGCGTGCACTCG 276754 Query 153067 TGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGGGGA 153112 || | || |||||||||||||| || || ||||||| || Sbjct 276755 GCGCTGCGCTTCGTGCCGGCCCAGTTGGCATCCTCGAGCTTGGTGA 276800 Score = 145 bits (160), Expect = 8e-30 Identities = 302/445 (68%), Gaps = 10/445 (2%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || || |||||||| || || || || | ||| | | ||||||||| || ||||| || Sbjct 275579 CCCGTGCCGATACCGTCGGCGCCGTTGAGCAGCACCTGCGGCACGACCGGGACGTACCAC 275638 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || ||||| | | | ||||| || || ||| ||||| | || | ||| |||| Sbjct 275639 TCGGGCTCGATGCTCTGCCCGTCCTCGTCGAGGTAGTTGAGGAGTGCGTCGTCCTTCGGG 275698 Query 117272 TCGAATATGTT---CTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 | ||| | | | || | | ||| | ||| |||||||||||||| | ||| || Sbjct 275699 TGGAAGAGCTGGCGCGTGATGCGCGGCAC--GGCC-GTGAAAATGTAACGGGCGCTCGCC 275755 Query 117329 GCATCCTTGCCACCAGCAAG--ACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCA 117386 || |||||||| || || | ||||| |||||||| || | ||| | | |||| Sbjct 275756 GCGTCCTTGCCGCC--CATGCTGCGCGTGCCGAATTGGCCGTTGGGCATGAGCATATTCA 275813 Query 117387 GGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCT 117446 ||||||| ||| ||||| || || | | |||||||| | || ||| | Sbjct 275814 CGTTGTTGCTGCCGCAAAAGTCCTGCGCAAGGCCCACAATCGTCATTACCAGACTCTGGT 275873 Query 117447 CACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGT 117506 | || |||||||||||||| ||||||| |||||| ||| |||||| |||||| || | Sbjct 275874 CGCCGTGGTGATACGCCGTGTGCTCCGACACGTAACCCTGCAGCTGCTGCACCTTGATTT 275933 Query 117507 CTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGAC 117566 | | | | ||||| ||||| ||| | | | ||||||||||| | ||||| || | Sbjct 275934 CCGTCTTGAGGTTACGCTTGAAGCAACCGAACAGGACCTTGCGCTGGCCCGGCTTGAGGC 275993 Query 117567 CATCCGCCACGTGAGGGATCGAACG 117591 | || ||||| |||||||| || Sbjct 275994 CGTCGACCACGCTCGGGATCGAGCG 276018 Score = 125 bits (138), Expect = 8e-24 Identities = 294/442 (67%), Gaps = 4/442 (1%) Strand=Plus/Plus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| || || || ||||||| ||| | | |||||| | ||| |||| || Sbjct 275579 CCCGTGCCGATACCGTCGGCGCCGTTGAGCAGCACCTGCGGCACGACCGGGACGTACCAC 275638 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 || ||||| | || ||||| || | ||| || | | | | ||| ||| Sbjct 275639 TCGGGCTCGATGCTCTGCCCGTCCTCGTCGAGGTAGTTGAGGAGTGCGTCGTCCTTCGGG 275698 Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGCA 152055 | ||| | | | || || || | || |||||| ||||| |||| ||| ||||| Sbjct 275699 TGGAAGAGCTGGCGCGTGATGCGCGGCACGGCCGTGAAAATGTAACGGGCGCTCGCCGCG 275758 Query 152056 TCCTTGCCACCTGCCAGC--CGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGT 152113 |||||||| || | || ||||| || || || || |||| ||| | || | || Sbjct 275759 TCCTTGCCGCC--CATGCTGCGCGTGCCGAATTGGCCGTTGGGCATGAGCATATTCACGT 275816 Query 152114 TGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCAC 152173 ||||| ||| || | ||| || | ||||||||| ||||||| || | Sbjct 275817 TGTTGCTGCCGCAAAAGTCCTGCGCAAGGCCCACAATCGTCATTACCAGACTCTGGTCGC 275876 Query 152174 CGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233 |||||||||||||||| ||||||| | ||| ||| || |||| |||||| || |||| Sbjct 275877 CGTGGTGATACGCCGTGTGCTCCGACACGTAACCCTGCAGCTGCTGCACCTTGATTTCCG 275936 Query 152234 TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGT 152293 || | ||||| ||||| || || | | |||||||||||| || || | |||| Sbjct 275937 TCTTGAGGTTACGCTTGAAGCAACCGAACAGGACCTTGCGCTGGCCCGGCTTGAGGCCGT 275996 Query 152294 CCACCACGTGAGGAATCGAACG 152315 | |||||| || ||||| || Sbjct 275997 CGACCACGCTCGGGATCGAGCG 276018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215945278400