Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4 109 5e-19 seq1 109 5e-19 >seq4 Length=1203127 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 26985 GCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCG 27044 |||||||| || || || || |||||||| |||||| | ||||| ||||| || || || Sbjct 406386 GCCATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCG 406445 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 || ||| |||| || | ||||| || || || ||||| || ||||| || || || Sbjct 406446 TCGGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGAC 406505 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 ||||||||| | || | ||| || || || | || ||| || || | ||| ||| Sbjct 406506 CAACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTAC 406565 Query 27165 AACATTCAAAAGGAG 27179 |||||||| |||||| Sbjct 406566 AACATTCAGAAGGAG 406580 >seq1 Length=1507387 Score = 109 bits (120), Expect = 5e-19 Identities = 168/239 (70%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 26982 TACGCCA---TGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTG 27038 ||||||| |||| || ||||| || || || || |||||| | || || || || || Sbjct 1005148 TACGCCACAATGCAAATTTTTGTTAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTC 1005207 Query 27039 GAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCA 27098 || |||| ||| ||||||| | ||||| || || || ||||| || ||||| || Sbjct 1005208 GAGTCGTCGGACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCT 1005267 Query 27099 CCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCC 27158 || || ||||||||| | || | |||||||| || |||| || | || || | Sbjct 1005268 CCGGACCAACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGC 1005327 Query 27159 GATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| |||||| || | || ||||| ||||| | || ||||| || Sbjct 1005328 GACTACAACATTCAGAAGGAGAGCACGCTGCACTTGGTGCTGCGTCTCCGTGGTGGTAT 1005386 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || || || |||||| | || || || || || || |||| Sbjct 1005385 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1005444 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | ||||| || || || ||||| || ||||| || || || ||| Sbjct 1005445 GACACGATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 1005504 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||||| || |||| || | || || ||| |||||| Sbjct 1005505 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAAC 1005564 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||| || | || ||||| ||||| | || ||||| || Sbjct 1005565 ATTCAGAAGGAGAGCACGCTGCACTTGGTGCTGCGTCTCCGTGGTGGTAT 1005614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918356508160