Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 >seq1 Length=1507387 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| |||||||||||||| || || || ||||| ||| ||| || || | || || Sbjct 1005822 CACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCTAAGCGTGCGGCCATCCTC 1005763 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| ||||| || |||||||| ||||| | || | || ||| |||||| Sbjct 1005762 CAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1005703 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | ||| || |||||| || || | ||||| | || Sbjct 1005702 GATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTT 1005643 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || |||||||||||||| Sbjct 1005642 GCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||||||||| || || || || || ||| ||| || || | || || Sbjct 1005366 CACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTC 1005307 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| ||||| || |||||||| ||||| | || | || ||| |||||| Sbjct 1005306 CAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1005247 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | ||| || |||||| || || | ||||| | || Sbjct 1005246 GATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTT 1005187 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || |||||||| |||||||| Sbjct 1005186 GCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005157 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || ||||||||||| || || || || || ||| ||| || || | || || Sbjct 1005594 CACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTC 1005535 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| ||||| || |||||||| ||||| | || | || ||| |||||| Sbjct 1005534 CAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 1005475 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| || |||| | | | ||| || |||||| || || | ||||| | || Sbjct 1005474 GATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTT 1005415 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || |||||||||||||| Sbjct 1005414 GCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545558119304