Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5 152 1e-31 seq4 125 2e-23 seq1 100 7e-16 >seq5 Length=687504 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| ||||||||||| ||| || || |||| ||||| ||| || || Sbjct 231867 ACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 231926 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || |||||||| || || ||||| Sbjct 231927 GCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACC 231986 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||||||| ||||| ||||| || | ||||| || | Sbjct 231987 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAG 232046 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | || || | |||||||||||| Sbjct 232047 GGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 232088 Score = 96.9 bits (106), Expect = 8e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | |||||||||||| || ||| || || |||| |||||| || || || Sbjct 142078 CGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTA 142019 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || || ||||| || || ||||| || || || ||||| |||||||| || Sbjct 142018 CGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCC 141959 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||||| |||||||| ||| || || ||| | | ||| Sbjct 141958 TCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTC 141918 >seq4 Length=1203127 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || ||| || || || | ||||| ||| || || | || || Sbjct 406600 AGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCC 406541 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || |||||||| || || || || |||||||| Sbjct 406540 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCC 406481 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| ||||| || | || || || | || |||||| Sbjct 406480 TGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 406421 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | |||||| Sbjct 406420 TTGCCAGTCAGAGTCTTGACGAAGATTTGCAT 406389 >seq1 Length=1507387 Score = 100 bits (110), Expect = 7e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | ||| || ||| || || || | ||||| ||| | || Sbjct 1005378 ACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGT 1005319 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || || || || || || |||||||| || ||||| || Sbjct 1005318 GCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCC 1005259 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| || || ||||| || | || || || | Sbjct 1005258 CTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAG 1005199 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 |||||||||||||| || | || || | || | ||||||| Sbjct 1005198 GGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCATT 1005156 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | ||| || ||| || || || | ||||| ||| | || Sbjct 1005606 ACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGT 1005547 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || || || || || || |||||||| || ||||| || Sbjct 1005546 GCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCC 1005487 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| || || ||||| || | || || || | Sbjct 1005486 CTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAG 1005427 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| || | || || | || | |||||| Sbjct 1005426 GGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385 Score = 96.9 bits (106), Expect = 8e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||| || || || || || || |||||||| || ||||| || ||| Sbjct 1005770 CCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGAATGCCCTCC 1005711 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| ||| || || ||||| || | || || || | ||| Sbjct 1005710 TTGTCCTGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTG 1005651 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || | || || | || | |||||| Sbjct 1005650 ATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531077765552