Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149135.1_202017-01- 09] 8 sequences; 7,732,420 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1 156 4e-33 seq4 154 1e-32 seq5 150 2e-31 >seq1 Length=1507387 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| |||||||||||||||||||||||||| |||||| Sbjct 1005383 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005324 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||||||||| || ||||| ||||||||||||| ||| Sbjct 1005323 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1005264 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || || | || | | | ||||| |||||| || Sbjct 1005263 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1005205 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || ||||| || || || || ||||| || ||||| ||||| Sbjct 1005204 CTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAAATTTGCAT 1005157 Score = 154 bits (170), Expect = 1e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| || |||||||||||||||||||||||||||||| Sbjct 1005840 GCCACCACGGAGACGCAGCACCAAGTGTAGCGTGCTCTCCTTCTGAATGTTATAGTCGCT 1005781 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || |||||||||||||| || ||||| ||||||||||||| || Sbjct 1005780 AAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGG 1005721 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| || | || || | || | | | ||||| |||||| | Sbjct 1005720 AATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1005662 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || ||||| || || || || ||||| || || || ||||| Sbjct 1005661 CCTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005613 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| |||||||||||||||||||||||||| |||||| Sbjct 1005611 CCACCACGGAGACGCAGCACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005552 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||||||||| || ||||| ||||||||||||| ||| Sbjct 1005551 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGGTCCGGAGGA 1005492 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || || | || | | | ||||| |||||| || Sbjct 1005491 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1005433 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || ||||| || || || || ||||| || || || ||||| Sbjct 1005432 CTCGAGGGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1005385 >seq4 Length=1203127 Score = 154 bits (170), Expect = 1e-32 Identities = 163/213 (77%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || ||||| |||||||||||||||||||| |||||| || ||||| |||| || Sbjct 406598 CACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTC 406539 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| || ||||| ||||| ||||||||||||| || | || |||||||||| Sbjct 406538 GAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTG 406479 Query 41773 GATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||| || | || | ||||| |||||| ||||| | || ||||| Sbjct 406478 GATCTTGGCCTTGACATTGTCG--ATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 406421 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || ||||| ||||| ||||| || |||||| Sbjct 406420 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATG 406388 >seq5 Length=687504 Score = 150 bits (166), Expect = 2e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || ||||||||||||||||| ||||| |||||| Sbjct 231862 CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 231921 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||||||||| ||||||||||||||||||| || Sbjct 231922 AGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGG 231981 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||||| | | |||||| ||||||||| Sbjct 231982 ATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACC 232041 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 || | || ||||| || || || || ||||| ||||| | |||||| || Sbjct 232042 TCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCATGGTA 232092 Score = 123 bits (136), Expect = 2e-23 Identities = 181/255 (71%), Gaps = 27/255 (11%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || |||||||||||||||||||| || || ||||| Sbjct 142084 CCACCGCGCAGACGCAGGACAAGGTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTC 142025 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || || || |||||||| || || ||||||||||| ||||||| ||| Sbjct 142024 AGGGTACGTCCATCCTCCAGTTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGA 141965 Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-------CTTCAACGACG------ACACAG 41798 | || |||||||||| ||| || ||| | | | || || |||| Sbjct 141964 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGACTGCGTCGTTAGCGTCGTATCACACACCA 141905 Query 41799 TG-TCGCTCGACTC--------CAC-CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTT 41848 || ||| |||| || ||| ||||| ||| || ||||| || || || |||||| Sbjct 141904 TGCTCGATCGAGTCGCTGCTCTCACACTCCAGCGTAATTGTTTTCCCTGTAAGTGTCTTT 141845 Query 41849 ACGAAAATCTGCATG 41863 ||||||||||||||| Sbjct 141844 ACGAAAATCTGCATG 141830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303953769600