Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq8 524 8e-144 seq1 145 8e-30 seq5 134 1e-26 seq4 127 2e-24 >seq8 Length=447081 Score = 524 bits (580), Expect = 8e-144 Identities = 640/863 (74%), Gaps = 15/863 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||| |||||| || || || | ||||| || | |||| || Sbjct 45887 GAGCCGCTGCTGAAGGAGAACAAGTCGCGCTTTGTCCTCTTCCCGATCCGCTACCACGAG 45828 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| ||||||||||||| ||||||| ||||||| Sbjct 45827 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTTCTGGACCGCCGAGGAGATGGACCTC 45768 Query 116696 TCCAAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||||| | || |||||||||| |||||||| || | | Sbjct 45767 TCGAAGGACCTGCACGACTGGGACCACCGCATGAACGACAATGAGCGCCACTTTGTGAGC 45708 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||||||| || || || ||||| |||||||||||||| ||||||||||| Sbjct 45707 CACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTATCGTCAACGAGAACCTGGTCGAGCGC 45648 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | ||||||||| |||||||| || |||||||||||||| |||||| || Sbjct 45647 TTCAGCGCCG-AGGTGCAGGCCGCCGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 45589 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||| | |||||||| | ||| ||| |||||||||||||||| | ||| |||| Sbjct 45588 GGAGAACATCCACTCGGAGACGTACTCGCTCCTCATCGACACGTACATCCGCGAGCCGGA 45529 Query 116932 GGAGA---AGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | || || ||| | || ||||| ||||||||||| || |||||| ||||||| Sbjct 45528 GCAGCGTGAGTTCC---TCTTCAACGCTATCGAGACGATTCCCGTCGTCAAGCAGAAGGC 45472 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 ||||||||| |||||||||||| | | ||| ||| | ||| |||||||| ||||| Sbjct 45471 CGAGTGGGCCCTGCGCTGGATCTCGGACAGGCGCGCCTCGTTCTCGGAGCGCCTTGTGGC 45412 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||| || |||||||||||| |||| || |||||| || ||| |||| || |||||||| Sbjct 45411 CTTTGCCGCCGTCGAGGGCATCTTTTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAA 45352 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| |||||||||||||| || ||| | ||| |||||||||||||| | |||||||| Sbjct 45351 GAAGCGCGGCCTCATGCCTGGTCTGTCGTTCTCGAACGAGCTCATCTCGCGCGACGAGGG 45292 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGG 117227 ||||| ||||||||||||| | ||||||| || || | |||| || | | | Sbjct 45291 CCTGCACACCGACTTTGCCTGTCTCCTGTTCAGCCACCTGAAGAAGCGTGCGCACCCTGA 45232 Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287 | || || | ||| ||||||| || || ||||| |||||| ||| | ||||| | Sbjct 45231 CACG-GTGAACCGCATCATCACCGAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACG 45173 Query 117288 CGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTC 117346 | |||| || ||| | || | || ||| | |||| || ||||||||||| Sbjct 45172 CCTTGCCTGTTTCGCTGATCGGCATGAA-CGCGCGCCTCATGTGCCAGTACATCGAGTTT 45114 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCG 117406 || || ||| | ||||| || | || | | | | |||||||||||| || | ||||| Sbjct 45113 GTGGCGGACCGTCTGCTCGTCAACCTCGGCAACCCGAAGCACTACAACTCGACGAACCCC 45054 Query 117407 CTGGACTTTATGAACCTCATCTC 117429 | ||||||||| | |||||| Sbjct 45053 TTCGACTTTATGGAGAACATCTC 45031 >seq1 Length=1515123 Score = 145 bits (160), Expect = 8e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || ||||| ||||| || ||||| |||| |||||| | | Sbjct 1005726 AATGCAAATCTTTGTTAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTC 1005785 Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | || |||| |||||| || |||| ||||| ||||| || || |||| | Sbjct 1005786 GGACACGATTGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGATC 1005844 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || || || | || ||||| |||||||| || | |||||| || | |||||||| Sbjct 1005845 AACAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACA 1005904 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||| ||||||||| ||||||||| || ||| |||| Sbjct 1005905 ACATTCAGAAGGAGAGCACGCTGCACCTGGTGCTGCG 1005941 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| ||||| || |||||| |||| ||||| | | Sbjct 1006183 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCG 1006242 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | |||||| || |||| ||||| ||||| || || ||||||| Sbjct 1006243 GACACGATTGACAATG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCGGACCA 1006301 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || ||||| |||||||| || | ||||| || | ||||||||| Sbjct 1006302 ACAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAGGATGGCCGCACGCTTAGCGACTACAA 1006361 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||||||| ||||||||| || ||| |||| Sbjct 1006362 CATTCAGAAGGAGAGCACGCTGCACCTGGTGCTGCG 1006397 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| ||||| || ||||| |||| |||||| | | Sbjct 1005955 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACGATCACTCTCGAAGTCGAATCGTCG 1006014 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| |||| | || || | ||||| |||||||| || |||| || Sbjct 1006015 GACACGATTGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGATCA 1006073 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | || | || ||||| |||||||| || | |||||| || | ||||||||| Sbjct 1006074 ACAGCGTTTGATTTTTGCCGGCAAGCAGCTGGAGGATGGGCGCACGCTTAGCGACTACAA 1006133 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||||||| ||||||||| || ||| |||| Sbjct 1006134 CATTCAGAAGGAGAGCACGCTGCACCTGGTGCTGCG 1006169 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| ||||| || ||||| |||| |||||| | | Sbjct 1006411 ATGCAAATCTTTGTCAAGACCCTCACTGGCAAGACGATCACTCTCGAGGTCGAATCGTCG 1006470 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| |||||| || || | ||||| |||||||| || ||||||| Sbjct 1006471 GACACGATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 1006529 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | || | || ||||| |||||||| || | ||||| |||| ||||||||| Sbjct 1006530 ACAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGTCGCACGCTCAGCGACTACAA 1006589 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||||||| |||| |||| | ||| |||| Sbjct 1006590 CATTCAGAAGGAGAGCACGTTGCACTTGGTGCTGCG 1006625 >seq5 Length=679138 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||| | ||||| || || || || || || || |||||| |||| || || | || Sbjct 231999 ATGCAAGTGTTCGTCAAGACCCTTACCGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 231940 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || || | ||||| ||||| ||||| ||||||| Sbjct 231939 GACACGATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAA 231880 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| |||||||| || | ||||| || | |||||||||| Sbjct 231879 CAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACGCTGAGCGACTACAAC 231820 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||||| || || ||| ||||| || | || || Sbjct 231819 ATCCAGAAGGAGAGCACGCTCCACCTTGTGCTGCGCCTGCGTGGTGG 231773 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| |||||||| || |||||||||| || || |||| |||||||| || ||||| Sbjct 141720 GACAAGGAGGGCATTCCGCCGGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAACTGGAG 141779 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | || ||||| | |||||||| |||||||||||| ||||||||| || || || Sbjct 141780 GATGGACGTACCCTGAGTGACTACAATATCCAGAAGGAGAGCACGCTGCACCTTGTCCTG 141839 Query 40903 CG 40904 || Sbjct 141840 CG 141841 >seq4 Length=1215465 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| || || ||| | || ||||| | | Sbjct 411813 ATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTCG 411872 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||||||||| ||||||| Sbjct 411873 GACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 411932 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || |||| ||||| || | |||||||||| Sbjct 411933 CAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAAC 411992 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| ||| ||||| || ||| Sbjct 411993 ATTCAGAAGGAGAGCACCCTGCACCTTGTG 412022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219148478080