Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq4 140 3e-28
seq1 129 5e-25
seq5 104 2e-17
seq8 86.0 5e-12
>seq4
Length=1215465
Score = 140 bits (154), Expect = 3e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || ||||||||||| ||||||| ||||| ||||||||||| || |||||| |
Sbjct 412004 CTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTGCTTACCAGCGAA 411945
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
||| |||||||| || || ||||| |||||||||||||| || || || || |
Sbjct 411944 GATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 411885
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| ||||||| ||||||||| | ||| | ||| ||||| |||||||| || ||
Sbjct 411884 GTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGTCAGAGTCTTGAC 411825
Query 118727 AAAAATCTGCATGGC 118741
|| || ||||||||
Sbjct 411824 GAAGATTTGCATGGC 411810
>seq1
Length=1515123
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | || ||||| ||| | || ||| || ||||||||||| ||||
Sbjct 1006411 TACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGC 1006352
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| | ||||| |||||| ||||| || || || |||| |||||||| || || ||||
Sbjct 1006351 TAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAG 1006292
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| ||| || || || | || | ||||||| |||||
Sbjct 1006291 GAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGA 1006232
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||| | ||| |||||||| ||||| || ||||| || |||||
Sbjct 1006231 CCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | || ||||| ||| | || ||| || ||||||||||| ||||
Sbjct 1006183 TACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGC 1006124
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| | |||||| |||||| ||||| || || || | || | |||||| ||||| ||||
Sbjct 1006123 TAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAG 1006064
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || ||| || | || | ||||||| ||||
Sbjct 1006063 GAATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGA 1006004
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| |||| || | ||| |||||||| ||||| || ||||| || |||||
Sbjct 1006003 CTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | | || ||||| ||| | || ||| || ||||||||||| ||||
Sbjct 1005955 TACCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGC 1005896
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| | |||||| |||||| ||||| || || || | || |||||||| ||||| ||||
Sbjct 1005895 TAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAG 1005836
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || ||||||||||| ||| || || || | || | ||||||| ||||
Sbjct 1005835 GAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGA 1005776
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || | ||| ||||| || || || || ||||| || |||||
Sbjct 1005775 CCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||||||| | || ||| || ||||||||||| ||||| | ||||| |||
Sbjct 1006623 CAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATC 1006564
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || ||||| | || | |||||| || || ||||| ||||||||||||||
Sbjct 1006563 CTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 1006504
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | || | ||||||| |||||||||| || | |||
Sbjct 1006503 CTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGT 1006444
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || ||||| || |||||
Sbjct 1006443 CTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411
>seq5
Length=679138
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||| | ||||| || ||| || || |||||||| ||||||| ||||| |||
Sbjct 231787 CAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATC 231846
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || || ||| |||| || ||||| || || ||||| || |||||||||||
Sbjct 231847 CTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 231906
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || || || | |||| ||||| | ||| ||||||| ||| | |||
Sbjct 231907 CTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGT 231966
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|| ||||| || || || || || | |||||||
Sbjct 231967 CTTCCCGGTAAGGGTCTTGACGAACACTTGCATGG 232001
>seq8
Length=447081
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/215 (69%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 134412 AGAGTCTTGTAAATGCCATCGACGCTGTCGTCCTTGATGCTTTGCAGGAAACACGAACAC 134471
|| || | ||| || || |||| ||||||||| || || ||||| ||||| ||
Sbjct 57473 AGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAGCACGACGAC 57414
Query 134472 ATTTGTTGACGACGCGTACCCGCCGAAAACAGAGTCGGGCTCGCGTGCGTAAAGG--TGC 134529
||||| | |||| || || ||||| ||||| |||||| ||||||| | |
Sbjct 57413 ATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTAAAGGCCTTC 57354
Query 134530 CCAGACTCATCAACTGATATGTTTCAATGACGCTCTTAACGTCGTCGCCGTGAATGGCCA 134589
| ||| || | | || || || || ||||| ||||| |||||||| ||| | |
Sbjct 57353 TCGGAC--ATGTAGTTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTGGATGCCGA 57296
Query 134590 GAGCGACGCGCATGAGCATGTGTTGGGGTCTCTCC 134624
|||||||||||||||||||| ||||| | ||||
Sbjct 57295 CGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCC 57261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830357701536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |