Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 seq4 109 4e-19 seq5 100 2e-16 >seq1 Length=1515123 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||||||||| | || || || ||||| |||||||||||| Sbjct 1006409 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1006350 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || |||| ||||||||| || || || || ||||| ||||| || Sbjct 1006349 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGA 1006290 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | |||| || | ||| ||||| Sbjct 1006289 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACC 1006230 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || |||||||||||||| || |||||||| ||||| Sbjct 1006229 TCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||||||||| | || || || ||||| |||||||||||| Sbjct 1006181 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1006122 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || |||| ||||||||| || ||||| | ||||| || || || Sbjct 1006121 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGA 1006062 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| ||||| | | | | |||| || | ||||||||| Sbjct 1006061 ATGCCCTCCTTGTCCTGGATCTTG-GCTTTGACGTTGTCAATCGTGTCCGACGATTCGAC 1006003 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || |||||||||||||| || |||||||| ||||| Sbjct 1006002 TTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||||| ||| || || || || ||||| |||||||||||| Sbjct 1006637 CCACCACGGAGACGCAGCACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTG 1006578 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || |||| ||||||||| || ||||| | ||||| ||||| || Sbjct 1006577 AGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGA 1006518 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| || | ||||||||| Sbjct 1006517 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACC 1006458 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||| ||||| || || |||||||| ||||| Sbjct 1006457 TCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | |||||||||||| | || || || ||||| |||||||||||| Sbjct 1005953 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1005894 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| || | || |||| ||||||||| || ||||| || ||||| || || || Sbjct 1005893 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGA 1005834 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | |||| || | ||||||||| Sbjct 1005833 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATCGTGTCCGACGATTCGACC 1005774 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||| ||||| || || |||||||| ||||| Sbjct 1005773 TCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727 >seq4 Length=1215465 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | || || || ||||| |||||||||||| |||| || |||| Sbjct 412024 AGCACAAGGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCC 411965 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || || ||||| ||||| || | || ||||||||| Sbjct 411964 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCC 411905 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | |||| || | ||| ||||| || | || || || Sbjct 411904 TGGATCTTGGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTC 411845 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGC 34392 ||||| || ||||| || || ||||| ||||| || Sbjct 411844 TTGCCAGTCAGAGTCTTGACGAAGATTTGCATGGC 411810 >seq5 Length=679138 Score = 100 bits (110), Expect = 2e-16 Identities = 165/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 34153 TTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTT 34212 ||| ||| | || || ||||| | |||||| ||||| | || || || ||||| ||||| Sbjct 231764 TTCTTCGCA-CCACCACGCAGGCGCAGCACAAGGTGGAGCGTGCTCTCCTTCTGGATGTT 231822 Query 34213 GTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTG 34272 ||||||| |||| || | || |||| ||||||||| ||||| || || ||||| || Sbjct 231823 GTAGTCGCTCAGCGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTG 231882 Query 34273 GTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGT 34332 ||| || | | ||||||||| ||||| ||| | || | |||| |||| Sbjct 231883 GTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATCGTGTCGGA 231942 Query 34333 CGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || | ||||| || || ||||| || || || || || | ||||| Sbjct 231943 AGACTCCACCTCGAGGGTGATCGTCTTCCCGGTAAGGGTCTTGACGAACACTTGCAT 231999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071968500480