Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1 161 8e-35 seq4 158 1e-33 seq5 145 6e-30 >seq1 Length=1515123 Score = 161 bits (178), Expect = 8e-35 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||||||||||||||||||||||||||||||| | || ||| | || ||| Sbjct 1006391 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCC 1006332 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| ||||||||||| ||||| | ||||||||||||| | Sbjct 1006331 AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGA 1006272 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| ||| ||||| | ||| ||||||||| Sbjct 1006271 ATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 1006212 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||| |||||||||||||| Sbjct 1006211 CCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||||||||||||||||||||||||||||||| | || ||| | || ||| Sbjct 1005935 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCC 1005876 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || |||| |||||||| || ||||| | ||||||||||||| | Sbjct 1005875 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGA 1005816 Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| | || | || | ||||| || ||||| | || |||||||| Sbjct 1005815 ATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTT 1005757 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || || ||||| |||||||||||||| Sbjct 1005756 GCCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| |||||||||||||||||||||||||||| | || |||| | || ||| Sbjct 1006619 ACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATCCTCC 1006560 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || || || ||||| ||||||||||| ||||| | |||||||||||| Sbjct 1006559 AGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1006500 Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| | || | || | ||||| || ||||| | || |||||||| Sbjct 1006499 ATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTT 1006441 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || || ||||| |||||||||||||| Sbjct 1006440 GCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411 Score = 141 bits (156), Expect = 7e-29 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| |||||||||||||||||||||||||||||||||| | || ||| | || ||| Sbjct 1006163 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCC 1006104 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || ||||| |||||||| || ||||| | |||||||||||| Sbjct 1006103 AGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGG 1006044 Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 | | || |||| || | || | ||||| || || || | || |||||||| Sbjct 1006043 A-TCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCGTCTT 1005985 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| || |||||||| |||||||||||||| Sbjct 1005984 GCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955 >seq4 Length=1215465 Score = 158 bits (174), Expect = 1e-33 Identities = 158/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| ||||||||||||||||||||||||||| |||| |||| |||| || || || Sbjct 412016 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTG 411957 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || || ||||| |||| ||||||||||| ||||| | |||||||||||| || || Sbjct 411956 CTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 411897 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | ||||| ||| ||||| | ||||||||||||||| || Sbjct 411896 GGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGT 411837 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 ||||||||| || |||||||||||| Sbjct 411836 CAGAGTCTTGACGAAGATTTGCATG 411812 >seq5 Length=679138 Score = 145 bits (160), Expect = 6e-30 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||| ||||||||||||||||| |||||||||||| |||| |||| | || ||||| || Sbjct 231796 GTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTG 231855 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||||||||| ||||| | ||||||||||||| || || Sbjct 231856 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 231915 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| |||||||| || || Sbjct 231916 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 231975 Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| || || | ||||||| Sbjct 231976 AAGGGTCTTGACGAACACTTGCATG 232000 Score = 89.7 bits (98), Expect = 4e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||||||||||||||| || |||||||| |||| || | || |||||||| Sbjct 141830 GTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTG 141771 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || || |||| ||||| ||||| || || | |||||||||||| Sbjct 141770 CTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCC 141719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075161480168