Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq1 161 8e-35
seq4 158 1e-33
seq5 145 6e-30
>seq1
Length=1515123
Score = 161 bits (178), Expect = 8e-35
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||||||||||||||||||||||||||||||| | || ||| | || |||
Sbjct 1006391 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCC 1006332
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || |||| ||||||||||| ||||| | ||||||||||||| |
Sbjct 1006331 AGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGA 1006272
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | ||||| ||| ||||| | ||| |||||||||
Sbjct 1006271 ATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTG 1006212
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || |||||||| ||||||||||||||
Sbjct 1006211 CCGGTGAGAGTCTTGACAAAGATTTGCAT 1006183
Score = 147 bits (162), Expect = 2e-30
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||||||||||||||||||||||||||||||| | || ||| | || |||
Sbjct 1005935 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCC 1005876
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || |||| |||||||| || ||||| | ||||||||||||| |
Sbjct 1005875 AGCTGCTTGCCGGCAAAAATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGA 1005816
Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
|| || ||| | || | || | ||||| || ||||| | || ||||||||
Sbjct 1005815 ATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTT 1005757
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||| || || ||||| ||||||||||||||
Sbjct 1005756 GCCAGTGAGGGTCTTAACAAAGATTTGCAT 1005727
Score = 147 bits (162), Expect = 2e-30
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||||| |||||||||||||||||||||||||||| | || |||| | || |||
Sbjct 1006619 ACCAAGTGCAACGTGCTCTCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATCCTCC 1006560
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || ||||| ||||||||||| ||||| | ||||||||||||
Sbjct 1006559 AGCTGCTTGCCAGCAAAAATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 1006500
Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
|| || ||| | || | || | ||||| || ||||| | || ||||||||
Sbjct 1006499 ATCTTGGCCTTGA-CGTTGTCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTT 1006441
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||| || || ||||| ||||||||||||||
Sbjct 1006440 GCCAGTGAGGGTCTTGACAAAGATTTGCAT 1006411
Score = 141 bits (156), Expect = 7e-29
Identities = 159/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||||||||||||||||||||||||||||||| | || ||| | || |||
Sbjct 1006163 ACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCC 1006104
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || ||||| || ||||| |||||||| || ||||| | ||||||||||||
Sbjct 1006103 AGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGG 1006044
Query 45248 ATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306
| | || |||| || | || | ||||| || || || | || ||||||||
Sbjct 1006043 A-TCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCGTCTT 1005985
Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||| || |||||||| ||||||||||||||
Sbjct 1005984 GCCGGTGAGAGTCTTGACAAAGATTTGCAT 1005955
>seq4
Length=1215465
Score = 158 bits (174), Expect = 1e-33
Identities = 158/205 (77%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
|||||| ||||||||||||||||||||||||||| |||| |||| |||| || || ||
Sbjct 412016 GTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACCGTCCTCGAGCTG 411957
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || ||||| |||| ||||||||||| ||||| | |||||||||||| || ||
Sbjct 411956 CTTACCAGCGAAGATCAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 411897
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | ||||| ||| ||||| | ||||||||||||||| ||
Sbjct 411896 GGCCTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGGGTAATCGTCTTGCCAGT 411837
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
||||||||| || ||||||||||||
Sbjct 411836 CAGAGTCTTGACGAAGATTTGCATG 411812
>seq5
Length=679138
Score = 145 bits (160), Expect = 6e-30
Identities = 155/205 (76%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| ||||||||||||||||| |||||||||||| |||| |||| | || ||||| ||
Sbjct 231796 GTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACCATCCTCCAGCTG 231855
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| |||||||| |||| ||||||||||| ||||| | ||||||||||||| || ||
Sbjct 231856 CTTGCCGGCGAAGATCAGGCGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTT 231915
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | ||||||||| | ||| |||||||| || ||
Sbjct 231916 GGCCTTCACATTCTCGATCGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCGGT 231975
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
|| ||||| || || | |||||||
Sbjct 231976 AAGGGTCTTGACGAACACTTGCATG 232000
Score = 89.7 bits (98), Expect = 4e-13
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||||||||||||||||||||| || |||||||| |||| || | || ||||||||
Sbjct 141830 GTGCAGCGTGCTCTCCTTCTGGATATTGTAGTCACTCAGGGTACGTCCATCCTCCAGTTG 141771
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || |||| ||||| ||||| || || | ||||||||||||
Sbjct 141770 CTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCC 141719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075161480168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |