Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq8 475 3e-129 seq4 116 3e-21 >seq8 Length=447081 Score = 475 bits (526), Expect = 3e-129 Identities = 1246/1878 (66%), Gaps = 42/1878 (2%) Strand=Plus/Minus Query 22107 TGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCG 22166 ||||||| || ||||| || || | || ||||| ||||| | || ||| ||||| Sbjct 59038 TGTCCACAGTGAACTGGATCGCCTGCGCAGCCGGGCGTGTGCGCAAGTAGTACGAGCCCG 58979 Query 22167 TCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCA 22226 |||| |||||| | ||||| ||||||| || |||||||| | | ||| | ||||| Sbjct 58978 TCTTGAGACCCTTTTTCCAGCCGTAAAAGTGCATCGACGTAAGCTGACCAAACGTCGGCG 58919 Query 22227 AGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCA 22286 | || || | |||| ||| ||||| | ||| || || || || ||||||| Sbjct 58918 CGCTCAGGTGGATGTTGAGACTCTGGCTCTGGCACACAAAGGCGCCACGGTCTGCGGCCA 58859 Query 22287 TATTTATCAATGTACGCATC-GAC--ATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 ||| | ||| || | || | | || ||||| || |||||||| || | |||| | Sbjct 58858 TATCGAG-AATC-AC-CTTCTGGCTGATCTCCCACACAGTCTTGTAGAGGGCCTTGATGT 58802 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAA 22403 || || |||| |||||| || ||| || || ||| | || | Sbjct 58801 GGTCAGGGATGCCAGCGATGTTCTGGATTGAGCCGCCATGCGCAATAATCTTCTGCTTCA 58742 Query 22404 TCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTT 22463 ||| || ||||| | || | || | || | ||| |||| ||||| | Sbjct 58741 TCGAGTCATTCCAGAGGCCCAGCTCGACAAGCTCGCGCAGCAGCCACGGGTTGACCACCT 58682 Query 22464 GAAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGAT 22522 | ||||| |||| |||| || ||||| |||||||||| ||| |||| || || | Sbjct 58681 GGAACTCACCGG-CAAGCACACGGCGCATGTAAATGTTGCTCGTGTACGGCTCAAAGCAC 58623 Query 22523 TCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAG 22582 || ||| || || |||||| || || || |||||||| ||||||| ||| |||||| Sbjct 58622 TCGTTGAAGCCAAGGATCTGACTCGTGGAGGCCGTCGGCATGGGCGCCATCAGCAGCGAG 58563 Query 22583 TTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGAC 22642 || | || ||||||| | ||| || ||||||| | |||||||||||| || ||| Sbjct 58562 TTGCGCAGACCGTGCTGGGCAATCTTTGCCTTGAGCGAGGCCCAGTCCCACAGGTCCGAC 58503 Query 22643 GGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCCTT 22700 ||||| || |||||| ||||| |||| | ||| |||| || |||||||| | Sbjct 58502 GGCGTGCGGTT---CCACATGTCGTACTGCAGGAGGCCCTGCGAG--GCAGGGCTGCCCT 58448 Query 22701 CGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGT 22760 ||||||| ||||| | |||||| || || || |||||||| |||||| || | | Sbjct 58447 CGTACGTCTCGTATGTGCCATATTCGGCCGCCAGCTCGCAGCTGCGCTCCAAGGCCGCAT 58388 Query 22761 AATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG-GCGGCGACGCTTTCGTACGGC 22819 || || ||||| ||||| | | |||| |||| || | ||| ||| |||| Sbjct 58387 GGTAAATGGTCTCAAAGATCTGCACATTCAGCA-GGCGCGCCTCCTGGCTGTCGAACGG- 58330 Query 22820 ATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTT 22878 ||| | ||| |||| |||||| || || | ||||| || || |||||||| || |||| Sbjct 58329 ATAGCCCATGATCATGAACGCATCGGCAAGGCCCTGGACACCGATACCGATGGGGCGGTG 58270 Query 22879 TTTCAGATTCGACACTTTTGC-CTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGT 22937 || ||||| ||| ||| || ||| || | || |||||| | | || Sbjct 58269 CCGCATGTTCGAGCGACGTGCACTCTC-CACAGGGTAGTAGTTGATATCGATGATGCGGT 58211 Query 22938 TCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAA------- 22990 ||| ||| || ||| | ||||| | | |||| ||| Sbjct 58210 TCAGGTTCTTGCACACCACTTTCGACACGTCGTGCAGGCGTTGGAAGTTGTATGTCTTCG 58151 Query 22991 ACGCCCGATTGTAC--AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCA 23048 | || | || | || |||| | | || ||||| || || ||||| || || Sbjct 58150 AGGCACCGGTGCCCTCAATAAACGTCGGCAGAGCAATCGACGCCAGGTTGCACACAGCTG 58091 Query 23049 CCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGC 23108 |||||| || ||||||| | ||| || || || || || | ||| ||||||| Sbjct 58090 TCTCGTCCGGCGAGCTGTACTCGATAATCTCCGTGCAGAGGTTCGAGCTCTTGATCGTGC 58031 Query 23109 CCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGC 23168 ||| || ||||||| || || || || ||| |||||||| || | | || ||| Sbjct 58030 CCAGGTTCTTCTGGTTACTCTTGCGGTTCGCCGAGTCCTTGTACAGGACAAAAGGATTGC 57971 Query 23169 CCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCA 23228 ||||||| | |||| ||||| ||| || ||||| |||| || | ||| ||| Sbjct 57970 CCGTCTCAATTTGCGCCTCGAGGATAGCGTACCACAGCTTCTGCGCCTTGACAGAGCGCT 57911 Query 23229 CGTACCTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGT 23288 | | ||| || ||||||||| | ||||| || ||||| || | || || |||| Sbjct 57910 TGGCGCGGCCCTCGCGCTCGTACTTCTCGTACAGAGCATCAAACTCCTCGCCATAGCAGT 57851 Query 23289 CGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGC 23348 | ||||| || || | | || ||||| || ||| || | ||| || | Sbjct 57850 CAGCCAGACCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTTCGACAC 57791 Query 23349 GTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCT 23408 | | ||| || ||||| || ||||| || || |||||| ||||| |||||||| |||| Sbjct 57790 GGCGCATGAACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCT 57731 Query 23409 CTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGA 23468 | ||||| |||||| || ||| | ||| || || ||||||| ||||||||||| | Sbjct 57730 CCTTGCCATGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCA 57671 Query 23469 GGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGT 23528 |||| | ||||| |||||||| | ||| ||||||||||| || ||||| || ||||||| Sbjct 57670 GGTAGATCGCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGT 57611 Query 23529 TGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACAC 23588 |||||||||| | ||||| ||||| | ||||||| | | ||| ||| || | Sbjct 57610 TGTTGTACACGCGGAGCATGGGCACAATACCGTTGCTCACACCGTTCGTGCCGGCGATGT 57551 Query 23589 TCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATA 23648 ||| || | || |||| |||||| | || | ||| || || ||| ||| || | Sbjct 57550 ACGAGCCCGTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGA 57491 Query 23649 TCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGA 23708 ||||||| || || || |||||||| || |||||||| ||| || || | | Sbjct 57490 TCATCGCACAGGTCTTGAGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCA 57431 Query 23709 CCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGG 23768 | | ||| ||||| |||||||| | |||||||| |||| |||||| ||||| | Sbjct 57430 CAAGGAAGCACGACGACATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACG 57371 Query 23769 CGTGCGTAAAGTATCCAT-TC-GACAT-TAGATTGTACGTGTCGATGGCGGCATCAATGT 23825 |||| |||||| || | || ||||| ||| |||||||| ||||| ||| | | || Sbjct 57370 CGTGTGTAAAG--GCCTTCTCGGACATGTAG-TTGTACGTCTCGATCGCGCTCGCCACGT 57314 Query 23826 CCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---CGACCG 23882 |||| ||||| || |||| |||||||||||| | ||||| || || | || | ||| Sbjct 57313 CCTCGCCGTGGATGCCGACGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCT 57254 Query 23883 TGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCAT 23942 | ||| || || | ||| || || || | | ||| || || ||||| ||| | Sbjct 57253 T---GCCATTGATCCGCAGCAGGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAGAAGTTGT 57197 Query 23943 AGTTAAAGTCACGATCGT 23960 ||| ||||| || |||| Sbjct 57196 AGTGGAAGTCGCGCTCGT 57179 Score = 228 bits (252), Expect = 7e-55 Identities = 581/872 (67%), Gaps = 39/872 (4%) Strand=Plus/Minus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 |||||| | || ||||| || | || || ||| | |||||||| ||||| || || Sbjct 45857 TTTGTCCTCTTCCCGATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCC 45798 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTC 57659 ||||| ||||||| ||| || | ||||| || ||||| ||| ||| ||||| || | Sbjct 45797 TCGTTCTGGACCGCCGAGGAGATGGACCTCTCGAAGGACCTGCACGACTGGGACCACCGC 45738 Query 57660 A---AAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 | | || |||| | | ||| | | ||||| |||| || || || || || || Sbjct 45737 ATGAACGACAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGCTTCGGAC 45678 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCG 57776 ||||| || |||||||| ||||||| | || || ||||| | | ||||| Sbjct 45677 GGTATCGTCAACGAGAACCTGGTCGAGCGCTTCAGCGCCGAGGTGCAGGCCGCCGAGGCC 45618 Query 57777 AGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTA 57836 | ||||| ||||| || || | || || ||| | || || || | ||| ||||| Sbjct 45617 CGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTC 45558 Query 57837 CTCATCGATACGTACGTGAAGGACAACGACGAGAAACGT-AGA--CTGTTCAACGCGATC 57893 |||||||| |||||| | || || ||| | ||| || || |||||||| ||| Sbjct 45557 CTCATCGACACGTACATCCGCGAGC-CG--GAGCAGCGTGAGTTCCTCTTCAACGCTATC 45501 Query 57894 GAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATCAAATGGATA----AA 57946 || || || |||| ||| |||| ||||| |||||| | | ||||| | Sbjct 45500 GAGACGATTCCCG---TCGTCAAGCAGAAGGCCGAGTGGGCCCTGCGCTGGATCTCGGAC 45444 Query 57947 AAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATT 58006 | |||| ||| ||||| | ||| | || | || || ||||||||||| || || || Sbjct 45443 AGGCGC----GCCTCGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTT 45388 Query 58007 CTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCT 58066 || |||||| ||||| | || || ||| | ||||| |||||||| ||||| || || Sbjct 45387 TTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCT 45328 Query 58067 GACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCT 58126 | |||| |||||| | || |||||||||||||| || || || || ||||| || || Sbjct 45327 GTCGTTCTCGAACGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGACTTTGCCTGTCT 45268 Query 58127 AATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGA---CATTATCAC 58183 ||| | ||| | || || | ||| | || || | ||| ||||| Sbjct 45267 CCTGTTCAGCCAC---CTGAAGAAGCGTGCGCACCCTGACACGGTGAACCGCATCATCAC 45211 Query 58184 CGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGG 58243 |||||| || || || || | || ||| | ||||| ||| | || || | || |||| Sbjct 45210 CGAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCCTTGCCTGTTTCGCTGATCGG 45151 Query 58244 TATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCG- 58302 |||||| | |||| ||||||| |||||||| || ||| | | |||||| Sbjct 45150 CATGAACGCGCGCCTCATGTGCCAGTACATCGAGTTTGTGGCGGAC---CGTCTGCTCGT 45094 Query 58303 -AACTGATTGGAGA---GCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTG 58358 ||| | || | | || |||||| ||| || || || || |||||| | Sbjct 45093 CAAC--CTCGGCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAAC 45036 Query 58359 ATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 ||||||||| |||||||| | ||||||||||| Sbjct 45035 ATCTCGCTCCAGGGCAAGTCGAACTTTTTCGA 45004 >seq4 Length=1215465 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||||||||| ||||| ||||| ||| | || || || |||| Sbjct 411812 CATGCAAATCTTCGTCAAGACTCTGACTGGCAAGACGATTACCCTTGAGGTCGAGTCGTC 411871 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || ||||||||| ||| | || || ||||| Sbjct 411872 GGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 411931 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || |||||||| || ||| | || ||| | || ||||||| || || Sbjct 411932 ACAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACGCTGAGCGACTACAA 411991 Query 31372 CATTCAAAAAGA 31383 |||||| || || Sbjct 411992 CATTCAGAAGGA 412003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766355423360