Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 138 1e-27 seq1 91.5 1e-13 >seq8 Length=447081 Score = 138 bits (152), Expect = 1e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| || | |||||| | || ||||| || ||||| || || || || || | ||| Sbjct 45209 GAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCCTTGCCTGTTTCGCTGATCGGC 45150 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 ||||||||| | | |||||| |||||||||||||||| |||||| | ||| | | | Sbjct 45149 ATGAACGCGCGCCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTCGTCAAC 45090 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||||| |||| || || |||||||| |||||| | ||||| ||| Sbjct 45089 CTCGGCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCG 45030 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060 ||| ||||||| | |||||||||||| | || || | ||| || Sbjct 45029 CTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 44986 >seq1 Length=1515123 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| || | ||| | ||| ||| || |||||||| || ||||| Sbjct 1006409 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1006350 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| || || ||||| || || ||| |||||||||| || || || ||||| Sbjct 1006349 AGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGTTGGTCCGGAGGA 1006290 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| | || | || | | || | ||||| | | ||| || Sbjct 1006289 ATACCCTCCTTGTCC-TGAATCTTGGCCTTGACATTGTCAATCGTGTCCGACGACTCGAC 1006231 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||| | ||| | |||||||||||| | || || || || ||||||||| Sbjct 1006230 CTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCATA 1006182 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| || | ||| | ||| ||| || |||||||| || ||||| Sbjct 1006181 CCACCACGGAGACGCAGCACCAGGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGCTA 1006122 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| | || || ||||| || || ||| | |||| ||| || ||||| ||||| Sbjct 1006121 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATCAAACGCTGTTGATCCGGAGGA 1006062 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || ||| | | || | ||||| | | || || Sbjct 1006061 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCAATCGTGTCCGACGATTCGACT 1006002 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | |||||||||||| | || || || || ||||||||| Sbjct 1006001 TCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACAAAGATTTGCATA 1005954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063950393600