Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq8 123 4e-23
>seq8
Length=447081
Score = 123 bits (136), Expect = 4e-23
Identities = 389/597 (65%), Gaps = 8/597 (1%)
Strand=Plus/Plus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| | ||| || || ||| |||||| |||||||| | || || ||||| ||
Sbjct 45262 AACAGGAGACAGGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTCGAG 45321
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|||| || || ||||| ||||| ||||| || ||||| || ||||| ||||| || ||
Sbjct 45322 AACGACAGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCC 45381
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC-TGGCG-- 50127
|| || ||||| || || || ||||||||||| ||||| | ||| | | ||| ||||
Sbjct 45382 GAGAAAAAGATGCCCTCGACGGCGGCAAAGGCCACAAGGCGCTC-CGAGAACGAGGCGCG 45440
Query 50128 -CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186
||||| ||||| | ||||| |||||||||| || || || ||||| ||
Sbjct 45441 CCTGTCCGAGATCCAGCGCAGGGCCCACTCGGCCTTCTGCTTGACGACGGGAATCGTCTC 45500
Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246
|| || || ||||| | | | | || | || || ||||| | ||
Sbjct 45501 GATAGCGTTGAAGAGGAACTCACGCTGCTCCGGCTCGCGGATGTACGTGTCGATGAGGAG 45560
Query 50247 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306
||| | ||||| || ||||| || || ||||| || |||||||| || | ||
Sbjct 45561 CGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGC 45620
Query 50307 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366
||||| |||||| || | | || || || | | || || || || || |||||
Sbjct 45621 CTCGGCGGCCTGCACCTCGGCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATACCGTC 45680
Query 50367 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG-GGT--GTTAG 50423
|| ||||| || |||| || || | | ||| || || ||| || | |
Sbjct 45681 CGAAGCAGCAAAGAAGGCCAGGACGTGGCTCACAAAGTGGCGCTCATTGTCGTTCATGCG 45740
Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483
| | ||| || | | || || || | || | || || | ||||| || || ||
Sbjct 45741 GTGGTCCCAGTCGTGCAGGTCCTTCGAGAGGTCCATCTCCTCGGCGGTCCAGAACGAGGC 45800
Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
||| ||||| || ||||| | |||||| || || || |||| ||||| | |||||
Sbjct 45801 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTAGCGGATCGGGAAGAGGACAAA 45857
Score = 111 bits (122), Expect = 2e-19
Identities = 437/685 (64%), Gaps = 2/685 (0%)
Strand=Plus/Minus
Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950
|| || || ||| | || ||||||| |||||| || || | | | || || |||
Sbjct 57842 CCTGGGCACTCGGCGGGGCACATCAGCGACCAGTCGCCGTTCTGTTCGACACGGCGCATG 57783
Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010
|| ||||| |||||||| || || | || || || | | | ||||| || ||
Sbjct 57782 AACAGATCGGGAATCCACAGCGCCAGGAACAGGTCGCGCGCGCGCACTTCCTCCTTGCCA 57723
Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070
||||| ||||| | || | | || || || |||||||| |||| ||| ||
Sbjct 57722 TGGTTCTTGCGCAGATCAATAAATTCAAAAACGTCCGAGTGCCACGGCTCCAGGTAGATC 57663
Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130
|| | | ||||| || ||||| || ||||| || | ||| | || ||||| || ||
Sbjct 57662 GCAAAGGCGCCCGGGCGCTTGTTGCCGCCCTGGTCCACGTAGCGCGCCGTGTTGTTGTAC 57603
Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190
|| | | ||| || | |||||| ||| ||| || || |||| ||| || ||
Sbjct 57602 ACGCGGAGCATGGGCACAATACCGTTGCTCACACCGTTCGTGCCGGCGATGTACGAGCCC 57543
Query 80191 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250
| |||||||| || || ||||| || || || ||| | || ||| | ||
Sbjct 57542 GTCGCACGAATGTTGTGGATGTTCAGACCAATACCGCCGGCCGTCTTGCTGATCATCGCA 57483
Query 80251 CATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAA 80310
|| || | ||| || || || ||||| || || || |||| | | || ||
Sbjct 57482 CAGGTCTTGAGCGTGTCGTATATACCCTCGATCGAGTCGTCCTTCATACTCACAAGGAAG 57423
Query 80311 CAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 80370
|| ||||||||| | || || ||||| || | ||| || || ||||| |||
Sbjct 57422 CACGACGACATTTGGGGGTTGGGCGTGCCGGCATTGAACAGGGTCGGCGACGCGTGTGTA 57363
Query 80371 AACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATG 80429
|| || || |||| |||| ||||||||||| || || | | ||| ||
Sbjct 57362 AAGGCCTTCTCGGACATGTAG-TTGTACGTCTCGATCGCGCTCGCCACGTCCTCGCCGTG 57304
Query 80430 AATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTAT 80489
|| || || ||||| ||||| | ||||||||| || | || | | |||| ||| ||
Sbjct 57303 GATGCCGACGGCGACGCGCATGAGCATGTGCTGGGGGCGCTCCGCAACCTTGCCATTGAT 57244
Query 80490 TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCG 80549
|| || ||| || || | || || || ||||| ||||||| ||||| ||
Sbjct 57243 CCGCAGCAGGTAGGAGCGCTCGAGCGTCTTGAAGCCAAAGAAGTTGTAGTGGAAGTCGCG 57184
Query 80550 TTCGTAAATAATAACCGAGTTGAGT 80574
|||||||| | |||||| ||||
Sbjct 57183 CTCGTAAATCACCGCCGAGTCGAGT 57159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268728173120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |