Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 seq8 87.8 2e-12 >seq1 Length=1515123 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053 || || || |||||||| ||||| | |||| | || || || || || || ||| | Sbjct 1006145 TCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAA 1006086 Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113 |||| ||| || ||||| ||||| ||||| || ||||| || || ||| | | Sbjct 1006085 ATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTG 1006026 Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173 || | |||||||| | ||| ||||| | ||| | |||||||||||| | || || || Sbjct 1006025 TCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACA 1005966 Query 143174 AATATTTGCATA 143185 || ||||||||| Sbjct 1005965 AAGATTTGCATA 1005954 >seq8 Length=447081 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691 || || || | ||| || | || ||||| || ||||| || || || | || | ||| Sbjct 45209 GAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCCTTGCCTGTTTCGCTGATCGGC 45150 Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50751 |||||||| | | |||||| ||||||| |||||||| || ||| | || | | | Sbjct 45149 ATGAACGCGCGCCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTCGTCAAC 45090 Query 50752 CTGGGACAACCGAAATACTATAATGC-ACGTAACCCCTTTCCGTTTATGAATAACATATC 50810 || || | ||||| |||| || | ||| |||||||| |||||| | ||||| || Sbjct 45089 CTCGGCAACCCGAAGCACTACAACTCGACG-AACCCCTTCGACTTTATGGAGAACATCTC 45031 Query 50811 GTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATA 50855 | | ||||||| | ||||||||||| | || || | ||| || Sbjct 45030 GCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 44986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014349298560