Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
seq8 87.8 2e-12
>seq1
Length=1515123
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAG 143053
|| || || |||||||| ||||| | |||| | || || || || || || ||| |
Sbjct 1006145 TCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAA 1006086
Query 143054 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGT 143113
|||| ||| || ||||| ||||| ||||| || ||||| || || ||| | |
Sbjct 1006085 ATCAAACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTG 1006026
Query 143114 TCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACG 143173
|| | |||||||| | ||| ||||| | ||| | |||||||||||| | || || ||
Sbjct 1006025 TCAATCGTGTCCGACGATTCGACTTCGAGAGTGATCGTCTTGCCGGTGAGAGTCTTGACA 1005966
Query 143174 AATATTTGCATA 143185
|| |||||||||
Sbjct 1005965 AAGATTTGCATA 1005954
>seq8
Length=447081
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50691
|| || || | ||| || | || ||||| || ||||| || || || | || | |||
Sbjct 45209 GAGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCCTTGCCTGTTTCGCTGATCGGC 45150
Query 50692 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50751
|||||||| | | |||||| ||||||| |||||||| || ||| | || | | |
Sbjct 45149 ATGAACGCGCGCCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTCGTCAAC 45090
Query 50752 CTGGGACAACCGAAATACTATAATGC-ACGTAACCCCTTTCCGTTTATGAATAACATATC 50810
|| || | ||||| |||| || | ||| |||||||| |||||| | ||||| ||
Sbjct 45089 CTCGGCAACCCGAAGCACTACAACTCGACG-AACCCCTTCGACTTTATGGAGAACATCTC 45031
Query 50811 GTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATA 50855
| | ||||||| | ||||||||||| | || || | ||| ||
Sbjct 45030 GCTCCAGGGCAAGTCGAACTTTTTCGAGCGCCGCGTTGCCGACTA 44986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014349298560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |