Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq8 288 1e-72
seq4 100 4e-16
>seq8
Length=447081
Score = 288 bits (318), Expect = 1e-72
Identities = 592/867 (68%), Gaps = 25/867 (3%)
Strand=Plus/Minus
Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053
||| || || ||| | || || || || ||| | |||||||| ||||| ||||||| ||
Sbjct 45852 CCTCTTCCCGATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTT 45793
Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113
||||| | ||| ||| | || || || ||||||||| |||| ||||| || |||
Sbjct 45792 CTGGACCGCCGAGGAGATGGACCTCTCGAAGGACCTGCACGACTGGGACCACCGCATGAA 45733
Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173
|| | |||||| | ||| | ||| | ||||||||||||| | || || || ||
Sbjct 45732 CGACAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTAT 45673
Query 125174 CGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCG 125231
||||||||| || ||| | || ||| ||| || || || ||||
Sbjct 45672 CGTCAACGAGAACCTGGTCGAGCGCTTCAGCGCCGAGGTG--CAGGCCGCCGAGGCCCGC 45615
Query 125232 TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291
||||| ||||| ||||| |||||||| |||||| | |||||||| | |||||| ||
Sbjct 45614 TGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTC 45555
Query 125292 ATTGACATGTACATTCGCGATCCG---CAACGTAAACACATGCTCTTTAACGCAATCGAC 125348
|| |||| |||||| ||||| ||| || ||| | | ||||| ||||| |||||
Sbjct 45554 ATCGACACGTACATCCGCGAGCCGGAGCAGCGTGAGTTC---CTCTTCAACGCTATCGAG 45498
Query 125349 ACGGTGCC-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGAC-GACA 125406
||| | || ||| | | | || ||| | |||| | || |||||| ||| | |
Sbjct 45497 ACGATTCCCGTCGTCAAGCAGAA-GGCCGAGTGGGCCCTGCGCTGGATCTCGGACAGGCG 45439
Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466
| || ||| | | || | || ||||| || |||||||| ||||||||||| || ||||
Sbjct 45438 CGCCT-CGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGG 45380
Query 125467 GTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526
| ||||| ||||||| ||||||||||||||||| |||||||| || ||| || |
Sbjct 45379 GCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCT 45320
Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTC 125586
|||||| | || || || ||||||||||| ||| ||||||||| ||| |||||
Sbjct 45319 CGAACGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTT-- 45262
Query 125587 GCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCG 125646
|| | | ||| | |||| | || ||| | ||| | | ||| | ||||
Sbjct 45261 -CAGCCACCTG-AAGAAGCGTGCGCACCC-----TGACACGGTGAACCGCATCATCACCG 45209
Query 125647 ATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCA 125706
| || ||| || || || || ||| | ||||| || | || || |||| ||||
Sbjct 45208 AGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCCTTGCCTGTTTCGCTGATCGGCA 45149
Query 125707 TGAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG 125765
||||| || | || |||||| ||||||| ||||||||||| || ||||| || | |
Sbjct 45148 TGAAC-GCGCGCCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTCGTCAAC 45090
Query 125766 TTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA 125825
| || ||| |||||| | | ||| ||||| || || ||| | ||| ||
Sbjct 45089 CTCGGCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCG 45030
Query 125826 CTAGAGGGTAAGACCAACTTTTTCGAG 125852
|| |||| ||| | ||||||||||||
Sbjct 45029 CTCCAGGGCAAGTCGAACTTTTTCGAG 45003
Score = 223 bits (246), Expect = 5e-53
Identities = 384/555 (69%), Gaps = 2/555 (0%)
Strand=Plus/Plus
Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890
||||| |||||| | ||||||| | | | || ||||| ||||||||||| ||
Sbjct 57586 GTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCAACAAG 57645
Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950
|| || ||||| | || ||||| |||| || |||||| ||||||||||||| |||||
Sbjct 57646 CGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATT 57705
Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010
|| ||||||| ||| |||| || || | || || | ||| |||| || ||
Sbjct 57706 GATCTGCGCAAGAACCATGGCAAGGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTG 57765
Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGC 97070
||| | || ||| |||||||| || ||| | | ||| ||||| || ||||||
Sbjct 57766 TGGATTCCCGATCTGTTCATGCGCCGTGTCGAACAGAACGGCGACTGGTCGCTGATGTGC 57825
Query 97071 CCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACG 97130
|||| | || || |||||| | || |||| ||||| |||||||| || |||| |
Sbjct 57826 CCCGCCGAGTGCCCAGGTCTGGCTGACTGCTATGGCGAGGAGTTTGATGCTCTGTACGAG 57885
Query 97131 GCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGC 97189
||||||| |||||||| | | | ||| | || | |||| |||||| | ||
Sbjct 57886 AAGTACGAGCGCGAGGGCCGCGCCAAGCGCTCTGTCAAGGCGC-AGAAGCTGTGGTACGC 57944
Query 97190 CATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAA 97249
||| | ||| || | ||||| || | ||| | | || |||||||| | | |||
Sbjct 57945 TATCCTCGAGGCGCAAATTGAGACGGGCAATCCTTTTGTCCTGTACAAGGACTCGGCGAA 58004
Query 97250 TCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAAT 97309
||||| || ||||| || ||||||| |||||| |||| || || |||||||| ||
Sbjct 58005 CCGCAAGAGTAACCAGAAGAACCTGGGCACGATCAAGAGCTCGAACCTCTGCACGGAGAT 58064
Query 97310 TGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCC 97369
| | |||||| ||| ||||||||||| || || ||| ||||| ||| | ||||||
Sbjct 58065 TATCGAGTACAGCTCGCCGGACGAGACAGCTGTGTGCAACCTGGCGTCGATTGCTCTGCC 58124
Query 97370 CAAGTTTGTAGAGGG 97384
| |||| | |||||
Sbjct 58125 GACGTTTATTGAGGG 58139
>seq4
Length=1215465
Score = 100 bits (110), Expect = 4e-16
Identities = 150/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123
|| || || ||||| ||||||||||| ||||| ||| | |||| ||| | ||||||||
Sbjct 582727 GAAGGTGACCTGGGTCCAGTGTACGGCTTCCAATGGCGCCACTTTGGCGCGAAGTATGTG 582786
Query 70124 GACTGC-GAGACAGACTATTCGGGTCAGGGTGTTGATCAA-TTGCAGACAATCATTGACA 70181
|| ||| || || |||| |||||||||||| |||||| | || || |||| ||
Sbjct 582787 GA-TGCTGATACCAACTACCAGGGTCAGGGTGTCGATCAACTCGCCCAC-GTCATCGAAC 582844
Query 70182 CTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATT 70241
||||||| || ||||| || || | || || || || ||||||| || |||
Sbjct 582845 AAATCAAGACGAACCCAACGGACCGGCGCATTTTACTGAGCGCATGGAACCCCATCGATC 582904
Query 70242 TGCACCAAATGGCACTACCACCGTGTCA 70269
|| || | ||||| || ||||| |||||
Sbjct 582905 TGGACAACATGGCGCTTCCACCTTGTCA 582932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059125894080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |