Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq8 288 1e-72 seq4 100 4e-16 >seq8 Length=447081 Score = 288 bits (318), Expect = 1e-72 Identities = 592/867 (68%), Gaps = 25/867 (3%) Strand=Plus/Minus Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053 ||| || || ||| | || || || || ||| | |||||||| ||||| ||||||| || Sbjct 45852 CCTCTTCCCGATCCGCTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCCTCGTT 45793 Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113 ||||| | ||| ||| | || || || ||||||||| |||| ||||| || ||| Sbjct 45792 CTGGACCGCCGAGGAGATGGACCTCTCGAAGGACCTGCACGACTGGGACCACCGCATGAA 45733 Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 || | |||||| | ||| | ||| | ||||||||||||| | || || || || Sbjct 45732 CGACAATGAGCGCCACTTTGTGAGCCACGTCCTGGCCTTCTTTGCTGCTTCGGACGGTAT 45673 Query 125174 CGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCG 125231 ||||||||| || ||| | || ||| ||| || || || |||| Sbjct 45672 CGTCAACGAGAACCTGGTCGAGCGCTTCAGCGCCGAGGTG--CAGGCCGCCGAGGCCCGC 45615 Query 125232 TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291 ||||| ||||| ||||| |||||||| |||||| | |||||||| | |||||| || Sbjct 45614 TGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGCTCCTC 45555 Query 125292 ATTGACATGTACATTCGCGATCCG---CAACGTAAACACATGCTCTTTAACGCAATCGAC 125348 || |||| |||||| ||||| ||| || ||| | | ||||| ||||| ||||| Sbjct 45554 ATCGACACGTACATCCGCGAGCCGGAGCAGCGTGAGTTC---CTCTTCAACGCTATCGAG 45498 Query 125349 ACGGTGCC-GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGAC-GACA 125406 ||| | || ||| | | | || ||| | |||| | || |||||| ||| | | Sbjct 45497 ACGATTCCCGTCGTCAAGCAGAA-GGCCGAGTGGGCCCTGCGCTGGATCTCGGACAGGCG 45439 Query 125407 AGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGG 125466 | || ||| | | || | || ||||| || |||||||| ||||||||||| || |||| Sbjct 45438 CGCCT-CGTTCTCGGAGCGCCTTGTGGCCTTTGCCGCCGTCGAGGGCATCTTTTTCTCGG 45380 Query 125467 GTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACA 125526 | ||||| ||||||| ||||||||||||||||| |||||||| || ||| || | Sbjct 45379 GCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGTCGTTCT 45320 Query 125527 GTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTC 125586 |||||| | || || || ||||||||||| ||| ||||||||| ||| ||||| Sbjct 45319 CGAACGAGCTCATCTCGCGCGACGAGGGCCTGCACACCGACTTTGCCTGTCTCCTGTT-- 45262 Query 125587 GCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCG 125646 || | | ||| | |||| | || ||| | ||| | | ||| | |||| Sbjct 45261 -CAGCCACCTG-AAGAAGCGTGCGCACCC-----TGACACGGTGAACCGCATCATCACCG 45209 Query 125647 ATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCA 125706 | || ||| || || || || ||| | ||||| || | || || |||| |||| Sbjct 45208 AGGCTGTGGCCATTGAGCAGGACTTTTTGACCGACGCCTTGCCTGTTTCGCTGATCGGCA 45149 Query 125707 TGAACTGCAAG-CTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG 125765 ||||| || | || |||||| ||||||| ||||||||||| || ||||| || | | Sbjct 45148 TGAAC-GCGCGCCTCATGTGCCAGTACATCGAGTTTGTGGCGGACCGTCTGCTCGTCAAC 45090 Query 125766 TTGATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCA 125825 | || ||| |||||| | | ||| ||||| || || ||| | ||| || Sbjct 45089 CTCGGCAACCCGAAGCACTACAACTCGACGAACCCCTTCGACTTTATGGAGAACATCTCG 45030 Query 125826 CTAGAGGGTAAGACCAACTTTTTCGAG 125852 || |||| ||| | |||||||||||| Sbjct 45029 CTCCAGGGCAAGTCGAACTTTTTCGAG 45003 Score = 223 bits (246), Expect = 5e-53 Identities = 384/555 (69%), Gaps = 2/555 (0%) Strand=Plus/Plus Query 96831 GTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGGGCGGCAATAAA 96890 ||||| |||||| | ||||||| | | | || ||||| ||||||||||| || Sbjct 57586 GTGCCCATGCTCCGCGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCAACAAG 57645 Query 96891 CGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATC 96950 || || ||||| | || ||||| |||| || |||||| ||||||||||||| ||||| Sbjct 57646 CGCCCGGGCGCCTTTGCGATCTACCTGGAGCCGTGGCACTCGGACGTTTTTGAATTTATT 57705 Query 96951 GAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTC 97010 || ||||||| ||| |||| || || | || || | ||| |||| || || Sbjct 57706 GATCTGCGCAAGAACCATGGCAAGGAGGAAGTGCGCGCGCGCGACCTGTTCCTGGCGCTG 57765 Query 97011 TGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGC 97070 ||| | || ||| |||||||| || ||| | | ||| ||||| || |||||| Sbjct 57766 TGGATTCCCGATCTGTTCATGCGCCGTGTCGAACAGAACGGCGACTGGTCGCTGATGTGC 57825 Query 97071 CCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACG 97130 |||| | || || |||||| | || |||| ||||| |||||||| || |||| | Sbjct 57826 CCCGCCGAGTGCCCAGGTCTGGCTGACTGCTATGGCGAGGAGTTTGATGCTCTGTACGAG 57885 Query 97131 GCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAA-CTGTGGAAGGC 97189 ||||||| |||||||| | | | ||| | || | |||| |||||| | || Sbjct 57886 AAGTACGAGCGCGAGGGCCGCGCCAAGCGCTCTGTCAAGGCGC-AGAAGCTGTGGTACGC 57944 Query 97190 CATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAA 97249 ||| | ||| || | ||||| || | ||| | | || |||||||| | | ||| Sbjct 57945 TATCCTCGAGGCGCAAATTGAGACGGGCAATCCTTTTGTCCTGTACAAGGACTCGGCGAA 58004 Query 97250 TCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAAT 97309 ||||| || ||||| || ||||||| |||||| |||| || || |||||||| || Sbjct 58005 CCGCAAGAGTAACCAGAAGAACCTGGGCACGATCAAGAGCTCGAACCTCTGCACGGAGAT 58064 Query 97310 TGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATCGGTCAATCTGCC 97369 | | |||||| ||| ||||||||||| || || ||| ||||| ||| | |||||| Sbjct 58065 TATCGAGTACAGCTCGCCGGACGAGACAGCTGTGTGCAACCTGGCGTCGATTGCTCTGCC 58124 Query 97370 CAAGTTTGTAGAGGG 97384 | |||| | ||||| Sbjct 58125 GACGTTTATTGAGGG 58139 >seq4 Length=1215465 Score = 100 bits (110), Expect = 4e-16 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 70064 GAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTA 70123 || || || ||||| ||||||||||| ||||| ||| | |||| ||| | |||||||| Sbjct 582727 GAAGGTGACCTGGGTCCAGTGTACGGCTTCCAATGGCGCCACTTTGGCGCGAAGTATGTG 582786 Query 70124 GACTGC-GAGACAGACTATTCGGGTCAGGGTGTTGATCAA-TTGCAGACAATCATTGACA 70181 || ||| || || |||| |||||||||||| |||||| | || || |||| || Sbjct 582787 GA-TGCTGATACCAACTACCAGGGTCAGGGTGTCGATCAACTCGCCCAC-GTCATCGAAC 582844 Query 70182 CTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATT 70241 ||||||| || ||||| || || | || || || || ||||||| || ||| Sbjct 582845 AAATCAAGACGAACCCAACGGACCGGCGCATTTTACTGAGCGCATGGAACCCCATCGATC 582904 Query 70242 TGCACCAAATGGCACTACCACCGTGTCA 70269 || || | ||||| || ||||| ||||| Sbjct 582905 TGGACAACATGGCGCTTCCACCTTGTCA 582932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059125894080