Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 109 1e-18 >seq1 Length=1515123 Score = 109 bits (120), Expect = 1e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || ||||| || || | || || || || || || || |||||| Sbjct 1005917 TCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAA 1005858 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||||||||| ||||| || || || || ||||||||||| || || || || Sbjct 1005857 ATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG 1005798 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || | ||| ||||| || || || ||||| ||||| || || || ||| Sbjct 1005797 TCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACA 1005738 Query 104549 AATATCTGCATTTTG 104563 || || |||||| || Sbjct 1005737 AAGATTTGCATTGTG 1005723 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || ||||| || || | ||| || || || || || ||||||||| Sbjct 1006601 TCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAA 1006542 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | |||||| || ||||| || || || || ||||| ||||| || || || || Sbjct 1006541 ATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 1006482 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || | ||| ||||| || || || ||||| ||||| || || || ||| Sbjct 1006481 TCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACA 1006422 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 1006421 AAGATTTGCAT 1006411 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || ||||| || || | || || || || || || || ||||| Sbjct 1006373 TCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAG 1006314 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | |||||| || ||||| || || || || ||||||||||| || || ||||| Sbjct 1006313 ATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTG 1006254 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || | || ||||| || || || ||||| || || || || || ||| Sbjct 1006253 TCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACA 1006194 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 1006193 AAGATTTGCAT 1006183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398281981664