Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01-
09] 8 sequences; 7,757,162 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 1e-18
>seq1
Length=1515123
Score = 109 bits (120), Expect = 1e-18
Identities = 141/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| |||||||| || ||||| || || | || || || || || || || ||||||
Sbjct 1005917 TCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCAAAA 1005858
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | ||||||||| ||||| || || || || ||||||||||| || || || ||
Sbjct 1005857 ATCAGACGCTGTTGATCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG 1005798
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | || || | ||| ||||| || || || ||||| ||||| || || || |||
Sbjct 1005797 TCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTAACA 1005738
Query 104549 AATATCTGCATTTTG 104563
|| || |||||| ||
Sbjct 1005737 AAGATTTGCATTGTG 1005723
Score = 102 bits (112), Expect = 2e-16
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| |||||||| || ||||| || || | ||| || || || || || |||||||||
Sbjct 1006601 TCCTTCTGAATGTTGTAGTCGCTGAGCGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAA 1006542
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| | | |||||| || ||||| || || || || ||||| ||||| || || || ||
Sbjct 1006541 ATCAAACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG 1006482
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | || || | ||| ||||| || || || ||||| ||||| || || || |||
Sbjct 1006481 TCAATCGTGTCCGACGATTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTGACA 1006422
Query 104549 AATATCTGCAT 104559
|| || |||||
Sbjct 1006421 AAGATTTGCAT 1006411
Score = 93.3 bits (102), Expect = 1e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| |||||||| || ||||| || || | || || || || || || || |||||
Sbjct 1006373 TCCTTCTGAATGTTGTAGTCGCTAAGCGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAG 1006314
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | |||||| || ||||| || || || || ||||||||||| || || |||||
Sbjct 1006313 ATCAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTG 1006254
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | || || | || ||||| || || || ||||| || || || || || |||
Sbjct 1006253 TCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGAGTCTTGACA 1006194
Query 104549 AATATCTGCAT 104559
|| || |||||
Sbjct 1006193 AAGATTTGCAT 1006183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398281981664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |